RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 RPP40O75818 363 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 IGSF6O95976 241 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 IGHV4-34P06331 123 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 NBL1P41271 181 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 KCNJ1P48048 391 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 CSNK1DP48730 415 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 GEMIN4P57678 1058 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 SNRPD1P62314 119 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 ZNF33AQ06730 810 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 FGL2Q14314 439 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ODF2Q5BJF6 829 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 LRRC49Q8IUZ0 686 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 TMEFF1Q8IYR6 380 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 RYBPQ8N488 228 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 HDDC3Q8N4P3 179 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 CCDC110Q8TBZ0 833 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 C16orf45Q96MC5 204 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 TRIB3Q96RU7 358 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDH12-208ENST00000522262 MLPHQ9BV36 600 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 AP1M1Q9BXS5 423 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 CPEB1Q9BZB8 566 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 UBP1Q9NZI7 540 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 TTLL3Q9Y4R7 772 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 TP53BP1Q12888 1972 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 BCLAF3A2AJT9 711 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 PPP1R12AO14974 1030 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 PLRG1O43660 514 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 ALDH1A2O94788 518 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 POP4O95707 220 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 ZSCAN5DPP0CG00 497 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 TIMP2P16035 220 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 NFKB1P19838 968 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 C5AR1P21730 350 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ITGB7P26010 798 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 CD86P42081 329 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 RALGDSQ12967 914 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 XRCC4Q13426 336 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 SNX1Q13596 522 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ZNF235Q14590 738 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 SEL1L2Q5TEA6 688 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 PMS2CLQ68D20 193 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 TIGD7Q6NT04 549 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 GDPD4Q6W3E5 623 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 SYT10Q6XYQ8 523 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 FAM71DQ8N9W8 422 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 IMP4Q96G21 291 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 TDRD1Q9BXT4 1180 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 TTC7AQ9ULT0 858 aaPredicted RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 ATXN2Q99700 1313 aaKnown RBP6.78□□□□□ -1.32
CDH12-208ENST00000522262 FAM186AA6NE01 2351 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 PIEZO1Q92508 2521 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 ADAMTS9Q9P2N4 1935 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 PCDH15Q96QU1 1955 aa6.78□□□□□ -1.32
CDH12-208ENST00000522262 AREL1O15033 823 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 KCNN4O15554 427 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 METTL18O95568 372 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ADH1BP00325 375 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 DNTTP04053 509 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ADRB3P13945 408 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 LHCGRP22888 699 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 MAOBP27338 520 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 CD6P30203 668 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 RENBPP51606 427 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 HS1BP3Q53T59 392 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ZNF805Q5CZA5 627 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 KDELC1Q6UW63 502 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 KLHDC8BQ8IXV7 354 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 PELI3Q8N2H9 469 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 C1orf216Q8TAB5 229 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 PIH1D2Q8WWB5 315 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 NKD2Q969F2 451 aaPredicted RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 EID2BQ96D98 161 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 RTP4Q96DX8 246 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 GPR174Q9BXC1 333 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 FAM126AQ9BYI3 521 aaPredicted RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 POLR1EQ9GZS1 481 aaKnown RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 SMOC1Q9H4F8 434 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 SUV39H2Q9H5I1 410 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 FBRSQ9HAH7 460 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 NEU2Q9Y3R4 380 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 GOLGA6L9A6NEM1 432 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 HACD1B0YJ81 288 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 H7C0C1 242 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 PRNPP04156 253 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 PSMB4P28070 264 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ATP5OP48047 213 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ETF1P62495 437 aaKnown RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 ZBTB16Q05516 673 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 CCDC6Q16204 474 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 CDKN3Q16667 212 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 LONRF2Q1L5Z9 754 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms