RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GAGE10A6NGK3 116 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 GTPBP1O00178 669 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 WDR46O15213 610 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 NKX2-8O15522 239 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMPRSS11DO60235 418 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ENTPD3O75355 529 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 KRT1P04264 644 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 WEE2P0C1S8 567 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ABCD3P28288 659 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 GRK5P34947 590 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 THBS4P35443 961 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 VAV2P52735 878 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 RARSP54136 660 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 RNASELQ05823 741 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 MPP3Q13368 585 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 BFSP2Q13515 415 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 CUL4AQ13619 759 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 THOC5Q13769 683 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 NFIL3Q16649 462 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 CYP2A13Q16696 494 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 PDCD4Q53EL6 469 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZNF484Q5JVG2 852 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 GPATCH4Q5T3I0 446 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 CFAP58Q5T655 872 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZNF618Q5T7W0 954 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 FAM90A2PQ658T7 463 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 OGFOD2Q6N063 350 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 TCTN3Q6NUS6 607 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 WDR93Q6P2C0 686 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM88Q6PEY1 159 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 GLB1LQ6UWU2 654 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ATF7IPQ6VMQ6 1270 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 P3H2Q8IVL5 708 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 DIS3L2Q8IYB7 885 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 OR4N4Q8N0Y3 316 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZNF366Q8N895 744 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 TDRD5Q8NAT2 981 aaKnown RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ETNPPLQ8TBG4 499 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 RNF31Q96EP0 1072 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 NPAS1Q99742 590 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZSWIM1Q9BR11 485 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 MRIQ9BWK5 157 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ACTRT3Q9BYD9 372 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 SEZ6LQ9BYH1 1024 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 AMBRA1Q9C0C7 1298 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 SPATC1LQ9H0A9 340 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D17Q9HA65 648 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALKBH4Q9NXW9 302 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 HCN3Q9P1Z3 774 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 VPS28Q9UK41 221 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 MIA3Q5JRA6 1907 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 DLG5Q8TDM6 1919 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 B4DLN1 442 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 PEX12O00623 359 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 SPTLC2O15270 562 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 FOXD2O60548 495 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CCNT1O60563 726 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 SCAF4O95104 1147 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 F9P00740 461 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 PLATP00750 562 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALDOAP04075 364 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC3A2P08195 630 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ASNSP08243 561 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CYP3A4P08684 503 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 PRKCHP24723 683 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ADRA1DP25100 572 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 LIPAP38571 399 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 PBX1P40424 430 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CALD1Q05682 793 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 MTAPQ13126 283 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 PDCLQ13371 301 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CAVIN4Q5BKX8 364 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 MFSD4BQ5TF39 518 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 C1QL3Q5VWW1 255 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ANKRD40Q6AI12 368 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC9A4Q6AI14 798 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 LAIR1Q6GTX8 287 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 KLHL24Q6TFL4 600 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 C16orf54Q6UWD8 224 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CPLX4Q7Z7G2 160 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ADGRD2Q7Z7M1 963 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CAND1Q86VP6 1230 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 CHD1LQ86WJ1 897 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZNF843Q8N446 348 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 C11orf44Q8N8P7 122 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ADPRHL1Q8NDY3 354 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 TNIP2Q8NFZ5 429 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 SUSD6Q92537 303 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 STAMQ92783 540 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 GNRHR2Q96P88 292 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 HAPLN3Q96S86 360 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALOXE3Q9BYJ1 711 aa5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 INTS2Q9H0H0 1204 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 UPF3AQ9H1J1 476 aaKnown RBP5.03□□□□□ -1.6
HMGB1P23-201ENST00000518743 MROH8Q9H579 483 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms