RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 VPS33BQ9H267 617 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 VPS16Q9H269 839 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PDE11AQ9HCR9 933 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PREBQ9HCU5 417 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZCCHC17Q9NP64 241 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ATAD3AQ9NVI7 634 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 LARSQ9P2J5 1176 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PDP2Q9P2J9 529 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 C2CD2Q9Y426 696 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 MYO5BQ9ULV0 1848 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 STRCQ7RTU9 1775 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 LTBP4Q8N2S1 1624 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 OVOS2A0A0J9YW53 1432 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 OVOS2Q6IE36 1432 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 IGSF1Q8N6C5 1336 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CFAP73A6NFT4 308 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRIM64A6NGJ6 449 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRIM64BA6NI03 449 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 C19orf81C9J6K1 198 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 E7ENQ6 273 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PSMD14O00487 310 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 HNRNPDLO14979 420 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 YKT6O15498 198 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 EXOC3O60645 756 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 C1QL1O75973 258 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 LCA5LO95447 670 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CLTAP09496 248 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 GHRP10912 638 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 UBL4AP11441 157 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PCP11498 1178 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC5A1P13866 664 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 FGFR2P21802 821 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 HOXC13P31276 330 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC16A2P36021 539 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 LIFRP42702 1097 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CASP5P51878 434 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCNG1P51959 295 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 RARSP54136 660 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT83P78385 493 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 SP2Q02086 613 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 HSPA14Q0VDF9 509 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 BNIP1Q12981 228 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 XRCC4Q13426 336 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 LY6KQ17RY6 165 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 ARL13BQ3SXY8 428 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAXCQ5TGI0 409 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRAMEF17Q5VTA0 474 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 VPS36Q86VN1 386 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 UNC5CLQ8IV45 518 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 FSTL5Q8N475 847 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 VGLL2Q8N8G2 317 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CFAP61Q8NHU2 1237 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 SGCDQ92629 289 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 KIFAP3Q92845 792 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 MED30Q96HR3 178 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CEP19Q96LK0 163 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 HS6ST2Q96MM7 605 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRR25Q96S07 402 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 MYD88Q99836 296 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 BPIFA3Q9BQP9 254 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 HAUS8Q9BT25 410 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM167BQ9BTA0 163 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 CIPCQ9C0C6 399 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRPV6Q9H1D0 765 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 C12orf10Q9HB07 376 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PIH1D3Q9NQM4 214 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 EURLQ9NYK6 297 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 FLRT1Q9NZU1 646 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 EMC3Q9P0I2 261 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 MTRF1LQ9UGC7 380 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 RASAL2Q9UJF2 1139 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 PHTF1Q9UMS5 762 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TIMM22Q9Y584 194 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 COMMD3-BMI1R4GMX3 469 aa4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 ARHGEF28Q8N1W1 1705 aaKnown RBP4.82□□□□□ -1.64
HMGB3P13-201ENST00000511263 TNS3Q68CZ2 1445 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 WDR17Q8IZU2 1322 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF521Q96K83 1311 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 LRRC3CA6NJW4 275 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 AP3B1O00203 1094 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 HAT1O14929 419 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KPNA5O15131 536 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KMOO15229 486 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ASAP2O43150 1006 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 USP12O75317 370 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 GUCY1B2O75343 617 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SUPT3HO75486 399 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SEC31AO94979 1220 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 BAG3O95817 575 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT6AP02538 564 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT6BP04259 564 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 GSTA1P08263 222 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 GYS1P13807 737 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms