RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MFHAS1Q9Y4C4 1052 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 MYO18AQ92614 2054 aaKnown RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 TBL1XO60907 577 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 CSH1P0DML2 217 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 CSH2P0DML3 217 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 PACS1Q6VY07 963 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 LDB1Q86U70 411 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 TMCO5AQ8N6Q1 288 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 LZICQ8WZA0 190 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 HDAC10Q969S8 669 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 LGALS13Q9UHV8 139 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 PLA2G4CQ9UP65 541 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 BCLAF3A2AJT9 711 aaKnown RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 OR6C75A6NL08 312 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 TSHRP16473 764 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 NEK2P51955 445 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 ZNF135P52742 658 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 PPM1JQ5JR12 505 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 DGCR14Q96DF8 476 aaKnown RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 CDK5RAP1Q96SZ6 601 aaKnown RBP11.41□□□□□ -0.58
SMPD4-218ENST00000482171 GLOD4Q9HC38 313 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 SLC17A6Q9P2U8 582 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 FBXO5Q9UKT4 447 aa11.41□□□□□ -0.58
SMPD4-218ENST00000482171 A0A0U1RQF3 1178 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 RBP1P09455 135 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 CCDC166P0CW27 439 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 GABRR2P28476 465 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 HOXA11P31270 313 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 BRMS1LQ5PSV4 323 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 CD101Q93033 1021 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 AZIN2Q96A70 460 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 VPS50Q96JG6 964 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 DNAJC1Q96KC8 554 aaKnown RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 HERPUD2Q9BSE4 406 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 ALG9Q9H6U8 611 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 C15orf38-AP3S2A0A0A6YYH1 394 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 E9PAM4 449 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 KATNA1O75449 491 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UQCRBP14927 111 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 ME2P23368 584 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 TCEAL1Q15170 157 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 NEDD8Q15843 81 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 ARPINQ7Z6K5 226 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 RBM23Q86U06 439 aaKnown RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UNC5BQ8IZJ1 945 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 GRIN3AQ8TCU5 1115 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 QKIQ96PU8 341 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 SLC25A13Q9UJS0 675 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 ZNF197O14709 1029 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UGT1A9O60656 530 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 ALBP02768 609 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 MPOP05164 745 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 OCM2P0CE71 109 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 CTPS1P17812 591 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 CDK7P50613 346 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 GHRHRQ02643 423 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 OLIG2Q13516 323 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 LINGO4Q6UY18 593 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 NIPA2Q8N8Q9 360 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 SLC44A1Q8WWI5 657 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMPD4-218ENST00000482171 IGFLR1Q9H665 355 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UGT1A7Q9HAW7 530 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UGT1A10Q9HAW8 530 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 UGT1A8Q9HAW9 530 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 SNX15Q9NRS6 342 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 FZD10Q9ULW2 581 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 SMCHD1A6NHR9 2005 aa11.4□□□□□ -0.58
SMPD4-218ENST00000482171 PRPF4O43172 522 aaKnown RBP eCLIP11.4□□□□□ -0.592e-6■□□□□ 9
SMPD4-218ENST00000482171 LZTS3O60299 673 aaPredicted RBP11.4□□□□□ -0.59
SMPD4-218ENST00000482171 LINGO3P0C6S8 592 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 ACRP10323 421 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 ECHS1P30084 290 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 INPP1P49441 399 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 GPR15P49685 360 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 HTRA3P83110 453 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 FUT11Q495W5 492 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 AGKQ53H12 422 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 BHLHE22Q8NFJ8 381 aaPredicted RBP11.4□□□□□ -0.59
SMPD4-218ENST00000482171 OR7D4Q8NG98 312 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 OR52K2Q8NGK3 314 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 CASP10Q92851 521 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 MARK4Q96L34 752 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 TSPAN18Q96SJ8 248 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 SYTL2Q9HCH5 934 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 VPS9D1Q9Y2B5 631 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 PCDHB9Q9Y5E1 797 aa11.4□□□□□ -0.59
SMPD4-218ENST00000482171 TRPC5OSA6NMA1 111 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms