RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 VOPP1Q96AW1 172 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 WRAP53Q9BUR4 548 aaKnown RBP12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 SUV39H2Q9H5I1 410 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ATP13A3Q9H7F0 1226 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 INTUQ9ULD6 942 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 TTC24A2A3L6 582 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 LRRD1A4D1F6 860 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MUSKO15146 869 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPOPO43791 374 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MFSD11O43934 449 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAFKO60675 156 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAGEC1O60732 1142 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MMP20O60882 483 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAP3K6O95382 1288 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 TIMP2P16035 220 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 ITIH2P19823 946 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 SERPINA4P29622 427 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 CYLC1P35663 651 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 RENBPP51606 427 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 ARSEP51690 589 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 FAM193AP78312 1265 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 BCL2L1Q07817 233 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 FOXC1Q12948 553 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 FGL2Q14314 439 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 TRIP6Q15654 476 aaKnown RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 NCBP2-AS2Q69YL0 99 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PTAR1Q7Z6K3 402 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 IQCHQ86VS3 1027 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 TMEM145Q8NBT3 493 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 FAM71BQ8TC56 605 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 RHBDD1Q8TEB9 315 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 RAPGEF5Q92565 580 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF641Q96N77 438 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF599Q96NL3 588 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PSKH2Q96QS6 385 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PANX2Q96RD6 677 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 TUBGCP5Q96RT8 1024 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 DKK3Q9UBP4 350 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCOLCE2Q9UKZ9 415 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 TFR2Q9UP52 801 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 HYOU1Q9Y4L1 999 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPEGQ15772 3267 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 SOWAHDA6NJG2 315 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 AREL1O15033 823 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 FLRT2O43155 660 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPINT1O43278 529 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 MTA2O94776 668 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 KRT1P04264 644 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 PRKCGP05129 697 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 ITGAVP06756 1048 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 KDELR1P24390 212 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 MMP13P45452 471 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 CSNK1DP48730 415 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 NSUN2Q08J23 767 aaKnown RBP eCLIP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 ELP6Q0PNE2 266 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 OVGP1Q12889 678 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 HNRNPDQ14103 355 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 UGP2Q16851 508 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 MARC1Q5VT66 337 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 BRAT1Q6PJG6 821 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 GCNT7Q6ZNI0 430 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 Q6ZSR6 202 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 OR13H1Q8NG92 308 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 PDCD6IPQ8WUM4 868 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 LUC7LQ9NQ29 371 aaKnown RBP12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDHA13Q9Y5I0 950 aa12.74□□□□□ -0.37
PPP1R3F-204ENST00000471261 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 A6NNZ2 444 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 FPGTO14772 594 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 RAD51BO15315 384 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDHGA12O60330 932 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 SDC3O75056 442 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 NEBLO76041 1014 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 PEX11BO96011 259 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 COMTP21964 271 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 GARSP41250 739 aaKnown RBP12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 SLC1A1P43005 524 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 GRK6P43250 576 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAXP61244 160 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms