RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ZCCHC8Q6NZY4 707 aaKnown RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 UMODL1-AS1Q8N2C9 162 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 MAPK15Q8TD08 544 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 CXorf40AQ8TE69 158 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 BTN2A2Q8WVV5 523 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 NAF1Q96HR8 494 aaKnown RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 EXOC2Q96KP1 924 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 DEPDC7Q96QD5 511 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 IL12RB2Q99665 862 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 EPAS1Q99814 870 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 PRORYQ9H606 182 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 CATSPERBQ9H7T0 1116 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 GPATCH2LQ9NWQ4 482 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TAS2R14Q9NYV8 317 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 PTPRBP23467 1997 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 J3KR12 359 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 TPP1O14773 563 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 TEX33O43247 280 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CSO75390 466 aaKnown RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 PIGNO95427 931 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 FERP16591 822 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 XPAP23025 273 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 IGFALSP35858 605 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 YPEL5P62699 121 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 STX1AQ16623 288 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 PARP15Q460N3 678 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 TMEM52BQ4KMG9 183 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 PRRT3Q5FWE3 981 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 GUSBP11Q6P575 273 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CRTC1Q6UUV9 634 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 EFL1Q7Z2Z2 1120 aaKnown RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 DNAAF5Q86Y56 855 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 TP53I13Q8NBR0 393 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CELF6Q96J87 481 aaKnown RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CPEB1Q9BZB8 566 aaKnown RBP13.43□□□□□ -0.26
CPSF4-210ENST00000469897 SLC39A8Q9C0K1 460 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 SUV39H2Q9H5I1 410 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 SPASTQ9UBP0 616 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 DKK3Q9UBP4 350 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 PCSK1NQ9UHG2 260 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 COQ6Q9Y2Z9 468 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CACNA1GO43497 2377 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CABIN1Q9Y6J0 2220 aa13.43□□□□□ -0.26
CPSF4-210ENST00000469897 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 EME2A4GXA9 379 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-210ENST00000469897 MUSKO15146 869 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 YY2O15391 372 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 BUB1BO60566 1050 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-210ENST00000469897 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 AIF1P55008 147 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 GABREP78334 506 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 PPARDQ03181 441 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 MAMLD1Q13495 774 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 CA9Q16790 459 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 UGP2Q16851 508 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 ISXQ2M1V0 245 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 CAMK1DQ8IU85 385 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 PHACTR4Q8IZ21 702 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 C1QTNF7Q9BXJ2 289 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 CLPBQ9H078 707 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-210ENST00000469897 APOBEC3BQ9UH17 382 aaKnown RBP13.42□□□□□ -0.26
CPSF4-210ENST00000469897 ADAMTS20P59510 1910 aa13.42□□□□□ -0.26
CPSF4-210ENST00000469897 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 CASC3O15234 703 aaKnown RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 DAPK3O43293 454 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PRKCGP05129 697 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 ANXA6P08133 673 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 TSHRP16473 764 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PSMA2P25787 234 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 LSSP48449 732 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PAPOLAP51003 745 aaKnown RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 TPI1P60174 286 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 TLE3Q04726 772 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 INPP5AQ14642 412 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 LRRC14Q15048 493 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 NR0B2Q15466 257 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 WSCD2Q2TBF2 565 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PERM1Q5SV97 790 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 ENPP7Q6UWV6 458 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 RD3Q7Z3Z2 195 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 SPACA3Q8IXA5 215 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms