RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GPR156Q8NFN8 814 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 NT5C3BQ969T7 300 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 SPON2Q9BUD6 331 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 EDEM3Q9BZQ6 932 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 INTS2Q9H0H0 1204 aaKnown RBP17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 ADNPQ9H2P0 1102 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 WDCPQ9H6R7 721 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 GPR34Q9UPC5 381 aa17.43■□□□□ 0.38
UBE2D4-209ENST00000454428 SPTBN1Q01082 2364 aaKnown RBP17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 NEMP1O14524 444 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ARSDP51689 593 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 IRF4Q15306 451 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ELOCQ15369 112 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 BRMS1LQ5PSV4 323 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 SLC26A9Q7LBE3 791 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 CCNJLQ8IV13 435 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 HID1Q8IV36 788 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 PASD1Q8IV76 773 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 Q8N9G6 341 aaPredicted RBP17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ZNF397Q8NF99 534 aaPredicted RBP17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 SNX21Q969T3 373 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 C1orf74Q96LT6 269 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 EPAS1Q99814 870 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 GTPBP4Q9BZE4 634 aaKnown RBP17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ATP13A1Q9HD20 1204 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 APPL1Q9UKG1 709 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 DOLKQ9UPQ8 538 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ZDHHC9Q9Y397 364 aa17.42■□□□□ 0.38
UBE2D4-209ENST00000454428 ALPIP09923 528 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 MAPK10P53779 464 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 POLE2P56282 527 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 SLC6A3Q01959 620 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 CETN1Q12798 172 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 PTPN20Q4JDL3 420 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 GJB7Q6PEY0 223 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 ZNF783Q6ZMS7 281 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 SPATA20Q8TB22 786 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 JPH3Q8WXH2 748 aaPredicted RBP17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 ISG20Q96AZ6 181 aaKnown RBP17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 TMEM159Q96B96 161 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 PGAP3Q96FM1 320 aaPredicted RBP17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 UBE2TQ9NPD8 197 aaPredicted RBP17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 RMND1Q9NWS8 449 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 RNF215Q9Y6U7 377 aa17.41■□□□□ 0.38
UBE2D4-209ENST00000454428 TOR1BO14657 336 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 TM7SF2O76062 418 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 UGT2B4P06133 528 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 ACVRL1P37023 503 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 CASRP41180 1078 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 BLKP51451 505 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 GNA12Q03113 381 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 KCNAB2Q13303 367 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 SERINC3Q13530 473 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 C16orf72Q14CZ0 275 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 CCDC40Q4G0X9 1142 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 BORAQ6PGQ7 559 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 SPRED1Q7Z699 444 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 C1orf131Q8NDD1 294 aaKnown RBP17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 OR6C4Q8NGE1 309 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 SCG3Q8WXD2 468 aaKnown RBP17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 PMEPA1Q969W9 287 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 KLHL32Q96NJ5 620 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 SEMA6CQ9H3T2 930 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 NDFIP2Q9NV92 336 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 PCDHGC3Q9UN70 934 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 PCDHB11Q9Y5F2 797 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 ICE1Q9Y2F5 2266 aa17.4■□□□□ 0.38
UBE2D4-209ENST00000454428 ANKRD36A6QL64 1941 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 KRIT1O00522 736 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 SRGAP2O75044 1071 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 CCL4P13236 92 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 CD82P27701 267 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 PEX5P50542 639 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 KRT85P78386 507 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 CERCAMQ5T4B2 595 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 OGFOD3Q6PK18 319 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 LRRC31Q6UY01 552 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 RD3Q7Z3Z2 195 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 ARHGEF2Q92974 986 aaKnown RBP17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 NKD1Q969G9 470 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 TBCBQ99426 244 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 B3GNT4Q9C0J1 378 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 COQ6Q9Y2Z9 468 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 ITPR2Q14571 2701 aa17.39■□□□□ 0.37
UBE2D4-209ENST00000454428 ARHGEF17Q96PE2 2063 aaPredicted RBP17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 RASGRP1O95267 797 aa17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 GSRP00390 522 aa17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 CTSEP14091 401 aa17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 GLB1P16278 677 aa17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 SULT1E1P49888 294 aa17.38■□□□□ 0.37
UBE2D4-209ENST00000454428 SRP54P61011 504 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms