RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TSTD2Q5T7W7 516 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 ACOT1Q86TX2 421 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 IFNEQ86WN2 208 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 RNF135Q8IUD6 432 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 CADM3Q8N126 398 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 PELI3Q8N2H9 469 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 SNX27Q96L92 541 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 GLT1D1Q96MS3 346 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 OSBPL2Q9H1P3 480 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 POMKQ9H5K3 350 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 NANOGQ9H9S0 305 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 MRPL40Q9NQ50 206 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 ATAD3AQ9NVI7 634 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 BFARQ9NZS9 450 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 IFT80Q9P2H3 777 aaPredicted RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 TCAF1Q9Y4C2 921 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 LACTBL1A8MY62 500 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 SLCO1B7G3V0H7 640 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TPD52L2O43399 206 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 TIMM44O43615 452 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 NDUFB5O43674 189 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 LCP1P13796 627 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 NMBRP28336 390 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 LAMTOR4Q0VGL1 99 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 ANO4Q32M45 955 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 PGS1Q32NB8 556 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TXNDC5Q8NBS9 432 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 SLC7A14Q8TBB6 771 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 STARD8Q92502 1023 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TOP1MTQ969P6 601 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 HPDLQ96IR7 371 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 CSF3RQ99062 836 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 SIAEQ9HAT2 523 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 MID2Q9UJV3 735 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 GIT1Q9Y2X7 761 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TMEM98Q9Y2Y6 226 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TRPC5OSA6NMA1 111 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 YDJCA8MPS7 323 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 NRP2O60462 931 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CLASP2O75122 1294 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 MTHFD1P11586 935 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 ARL4AP40617 200 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 BCL2A1Q16548 175 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CARTPTQ16568 116 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 HSDL1Q3SXM5 330 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ATF7IP2Q5U623 682 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 DNAJC14Q6Y2X3 702 aaPredicted RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 TMEM110Q86TL2 294 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ANKRD52Q8NB46 1076 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 STYXQ8WUJ0 223 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 NDRG1Q92597 394 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 SEPT8Q92599 483 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ITPKCQ96DU7 683 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 TMEM181Q9P2C4 612 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CPQQ9Y646 472 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 EVPLQ92817 2033 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 NME4O00746 187 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 DPYSL4O14531 572 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CLPXO76031 633 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 PABPC1P11940 636 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 CHRM3P20309 590 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 PSMD8P48556 350 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 RAD23AP54725 363 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 POU5F1BQ06416 359 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CTBP1Q13363 440 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 SURF1Q15526 300 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ZNF354CQ86Y25 554 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CEP97Q8IW35 865 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 DHRSXQ8N5I4 330 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 C7orf31Q8N865 590 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 SNX19Q92543 992 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 KCNN1Q92952 543 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ALPK1Q96QP1 1244 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 C1orf50Q9BV19 199 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 GIMAP2Q9UG22 337 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 COL11A1P12107 1806 aaPredicted RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 HCRTO43612 131 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 B4GALT4O60513 344 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.167e-11■■□□□ 13.3
VPS52-212ENST00000445902 FASP25445 335 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 EEF1DP29692 281 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 KCNJ8Q15842 424 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 SOWAHAQ2M3V2 549 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CLEC6AQ6EIG7 209 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 LCLAT1Q6UWP7 414 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 RETREG3Q86VR2 466 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 DENND6AQ8IWF6 608 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 GABPB2Q8TAK5 448 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms