RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 ATPAF2Q8N5M1 289 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
RFFL-204ENST00000414419 SLC35G2Q8TBE7 412 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 HCAR2Q8TDS4 363 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 CXorf40AQ8TE69 158 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 ZNF641Q96N77 438 aaPredicted RBP11.34□□□□□ -0.59
RFFL-204ENST00000414419 ZNF599Q96NL3 588 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 TUBGCP5Q96RT8 1024 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 SUV39H2Q9H5I1 410 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 ATP13A3Q9H7F0 1226 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 FZD3Q9NPG1 666 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 SEPT3Q9UH03 358 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
RFFL-204ENST00000414419 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 HS3ST3A1Q9Y663 406 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 LRRK1Q38SD2 2015 aa11.34□□□□□ -0.59
RFFL-204ENST00000414419 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 A6NNZ2 444 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 FPGTO14772 594 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 CBFA2T3O75081 653 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 PIGNO95427 931 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ARHGAP25P42331 645 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ABL2P42684 1182 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 SCNN1BP51168 640 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 SUOXP51687 545 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 SHC2P98077 582 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 BCL2L1Q07817 233 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 NSUN2Q08J23 767 aaKnown RBP eCLIP11.33□□□□□ -0.6
RFFL-204ENST00000414419 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 TBX2Q13207 712 aaPredicted RBP11.33□□□□□ -0.6
RFFL-204ENST00000414419 LRRC73Q5JTD7 316 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ERAP2Q6P179 960 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ARHGAP36Q6ZRI8 547 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 PTAR1Q7Z6K3 402 aaPredicted RBP11.33□□□□□ -0.6
RFFL-204ENST00000414419 GATAD2AQ86YP4 633 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
RFFL-204ENST00000414419 TMEM145Q8NBT3 493 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 C1QTNF7Q9BXJ2 289 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 ITM2BQ9Y287 266 aa11.33□□□□□ -0.6
RFFL-204ENST00000414419 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 AREL1O15033 823 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 TM7SF2O76062 418 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 FTH1P19P0C7X4 201 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 TIMP2P16035 220 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 MAN1A1P33908 653 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 RXRGP48443 463 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 CLDN2P57739 230 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 AP1S1P61966 158 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 POLR2LP62875 67 aaKnown RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 SLC10A7Q0GE19 358 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 UGP2Q16851 508 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 HS1BP3Q53T59 392 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 BRAT1Q6PJG6 821 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 Q6ZSR6 202 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 GLRX5Q86SX6 157 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 SPATS2Q86XZ4 545 aaKnown RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 OR13H1Q8NG92 308 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 SAP25Q8TEE9 199 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 RFFLQ8WZ73 363 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 TSC1Q92574 1164 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 LENG8Q96PV6 779 aaPredicted RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 PSKH2Q96QS6 385 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 C1QTNF2Q9BXJ5 285 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 FTSJ1Q9UET6 329 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 GGT7Q9UJ14 662 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 BTBD3Q9Y2F9 522 aa11.32□□□□□ -0.6
RFFL-204ENST00000414419 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
RFFL-204ENST00000414419 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.31□□□□□ -0.6
RFFL-204ENST00000414419 TNFSF14O43557 240 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
RFFL-204ENST00000414419 MAFKO60675 156 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 MMP20O60882 483 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 NEBLO76041 1014 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 CD48P09326 243 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 IL4RP24394 825 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 NFKBIAP25963 317 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 NOP2P46087 812 aaKnown RBP11.31□□□□□ -0.6
RFFL-204ENST00000414419 RABIFP47224 123 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 TAS2R40P59535 323 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 BNIP3Q12983 259 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 FGL2Q14314 439 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 SPA17Q15506 151 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 MARC1Q5VT66 337 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
RFFL-204ENST00000414419 ABI3BPQ7Z7G0 1075 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms