RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CPQQ9Y646 472 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MYO7AQ13402 2215 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 BTN3A1O00481 513 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 BIRC5O15392 142 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 CREMQ03060 361 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 GALNT2Q10471 571 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 C14orf80Q86SX3 495 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 DENND6AQ8IWF6 608 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 FBXO39Q8N4B4 442 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF333Q96JL9 665 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 FCRL5Q96RD9 977 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MAGEH1Q9H213 219 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 TCAF1Q9Y4C2 921 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF487B1APH4 448 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 HLA-DQB2P05538 268 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 F7P08709 466 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 LPOP22079 712 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 GRIA4P48058 902 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 LIMK2P53671 638 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 DLG2Q15700 870 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 FOPNLQ96NB1 174 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CATSPER2Q96P56 530 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 RBBP8Q99708 897 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ACSS2Q9NR19 701 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 A0A087X1B8 175 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 J3KR12 359 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 GNGT2O14610 69 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF197O14709 1029 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CAPN15O75808 1086 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 GUCA1CO95843 209 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CLTBP09497 229 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 MAPKAPK2P49137 400 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 TMTC4Q5T4D3 741 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 PCYOX1LQ8NBM8 494 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 RFWD2Q8NHY2 731 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 SH3KBP1Q96B97 665 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 BBS2Q9BXC9 721 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 MAN1C1Q9NR34 630 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 TTC24A2A3L6 582 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CD3EAPO15446 510 aaKnown RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CNTN5O94779 1100 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 UNC5CO95185 931 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ANP32DO95626 131 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CACNA2D1P54289 1103 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 PRKAA2P54646 552 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 CDH4P55283 916 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 KCNJ2P63252 427 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 IL10RBQ08334 325 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 PFKFB4Q16877 469 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF284Q2VY69 593 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 EML3Q32P44 896 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 OR4K2Q8NGD2 314 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 OR4L1Q8NH43 312 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 SDCCAG3Q96C92 435 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 GBP5Q96PP8 586 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ZDHHC6Q9H6R6 413 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ASB8Q9H765 288 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 ZMYND8Q9ULU4 1186 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-202ENST00000399804 YIPF1Q9Y548 306 aa14.15□□□□□ -0.14
SCAF4-202ENST00000399804 PRR23AA6NEV1 266 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 CCL16O15467 120 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 LZTS3O60299 673 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 NDST3O95803 873 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 RPL14P50914 215 aaKnown RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 USP4Q13107 963 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 GTF2H3Q13889 308 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 CLLU1OSQ5K130 101 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ANKS6Q68DC2 871 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ANGPTL8Q6UXH0 198 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ARHGAP36Q6ZRI8 547 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SCUBE1Q8IWY4 988 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SNX31Q8N9S9 440 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SNX19Q92543 992 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SAR1AQ9NR31 198 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 RIC8BQ9NVN3 520 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 C2orf71A6NGG8 1288 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 KPNA3O00505 521 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 PDHA1P08559 390 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 TSPAN8P19075 237 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 CDC25CP30307 473 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 STX5Q13190 355 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 PKDCCQ504Y2 493 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 GPR158Q5T848 1215 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 MARK2Q7KZI7 788 aaKnown RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 TXLNGYQ9BZA5 131 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ZCWPW1Q9H0M4 648 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 EFCAB1Q9HAE3 211 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 MID1IP1Q9NPA3 183 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 TMEM216Q9P0N5 145 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 C1orf232A0A0U1RR37 186 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms