RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 OR4N4Q8N0Y3 316 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 MMP21Q8N119 569 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 DRAXINQ8NBI3 349 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 NOC3LQ8WTT2 800 aaKnown RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 ARRDC3Q96B67 414 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 REXO5Q96IC2 774 aaKnown RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 CTDSP1Q9GZU7 261 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 RWDD1Q9H446 243 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 SUDS3Q9H7L9 328 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 MRPS18AQ9NVS2 196 aaKnown RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 JKAMPQ9P055 326 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 DNAJB11Q9UBS4 358 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 HESX1Q9UBX0 185 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 SLC23A1Q9UHI7 598 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 CD207Q9UJ71 328 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 ING1Q9UK53 422 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 PCDHB7Q9Y5E2 793 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 PCDHA10Q9Y5I2 948 aa5.1□□□□□ -1.59
GABPB1-204ENST00000396464 EIF4G1Q04637 1599 aaKnown RBP5.1□□□□□ -1.59
GABPB1-204ENST00000396464 ATRNL1Q5VV63 1379 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 LOC102723996A0A087X1L8 192 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 TCRBV7S2A1N4TA0A589 114 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CTAGE15A4D2H0 777 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SLC9B1P1A6NJY1 282 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 A6NL46 340 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SNAP23O00161 211 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 QSOX1O00391 747 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 TEX33O43247 280 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 LIASO43766 372 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 ZNF202O95125 648 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 EPN2O95208 641 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PTBP3O95758 552 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CTAGE8P0CG41 777 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 RAP2AP10114 183 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CYP2C9P11712 490 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NCF1P14598 390 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 YY1P25490 414 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NTSR1P30989 418 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SKIV2L2P42285 1042 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PITPNBP48739 271 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 KHKP50053 298 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PTTG1IPP53801 180 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CD83Q01151 205 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NIPAL4Q0D2K0 466 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CSTF3Q12996 717 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CHIT1Q13231 466 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SP140Q13342 867 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SNX1Q13596 522 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 FRG1Q14331 258 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 C15orf59Q2T9L4 293 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 DPCR1Q3MIW9 517 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 ZIK1Q3SY52 487 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 ZMAT1Q5H9K5 638 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CYP4A22Q5TCH4 519 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 FAM160B1Q5W0V3 765 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 AFMIDQ63HM1 303 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 HEPHL1Q6MZM0 1159 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PTCHD4Q6ZW05 846 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 KCTD9Q7L273 389 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 RRM2BQ7LG56 351 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 MIER3Q7Z3K6 550 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CTAGE6Q86UF2 777 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CEP57Q86XR8 500 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CTAGE4Q8IX94 777 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 BCL6BQ8N143 479 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 FSTL5Q8N475 847 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NHLRC2Q8NBF2 726 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 RBM15BQ8NDT2 890 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 MBD3L2Q8NHZ7 208 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PSMA8Q8TAA3 256 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NEK9Q8TD19 979 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 BCAS4Q8TDM0 211 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 CASP10Q92851 521 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 HDAC11Q96DB2 347 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 LRIG1Q96JA1 1093 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 WDR92Q96MX6 357 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 GDAP1L1Q96MZ0 367 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 RBM14Q96PK6 669 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 MAP7D2Q96T17 732 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 KCNK16Q96T55 309 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 PIMREGQ9BSJ6 248 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 KIFC3Q9BVG8 833 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 NUP85Q9BW27 656 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 MTMR12Q9C0I1 747 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 KATNBL1Q9H079 304 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 IKZF4Q9H2S9 585 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 C12orf65Q9H3J6 166 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 DENND2DQ9H6A0 471 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 DDX4Q9NQI0 724 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 INTS13Q9NVM9 706 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 ZNHIT6Q9NWK9 470 aaKnown RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 SPASTQ9UBP0 616 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 LEF1Q9UJU2 399 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-204ENST00000396464 TEX264Q9Y6I9 313 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 AOX1Q06278 1338 aa5.09□□□□□ -1.59
GABPB1-204ENST00000396464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.09□□□□□ -1.63e-6■■□□□ 12.8
GABPB1-204ENST00000396464 GXYLT2A0PJZ3 443 aa5.08□□□□□ -1.6
GABPB1-204ENST00000396464 PER2O15055 1255 aa5.08□□□□□ -1.6
GABPB1-204ENST00000396464 CBFA2T3O75081 653 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms