RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 ARRDC2Q8TBH0 407 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 WFDC5Q8TCV5 224 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 FBF1Q8TES7 1133 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 ACDQ96AP0 544 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 MRGPRX2Q96LB1 330 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 FSD1LQ9BXM9 530 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 PLAC1Q9HBJ0 212 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 ARNT2Q9HBZ2 717 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 KIAA1522Q9P206 1035 aaPredicted RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 VPS28Q9UK41 221 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 TNFRSF10AO00220 468 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 ALDH1A2O94788 518 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 FESP07332 822 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 GLDCP23378 1020 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 PRKCHP24723 683 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 ATP5DP30049 168 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 CSKP41240 450 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 SLCO1A2P46721 670 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 PLK1P53350 603 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 WNT3AP56704 352 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 GEMIN4P57678 1058 aaKnown RBP12.21□□□□□ -0.46
USF1-203ENST00000368021 MAXP61244 160 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 ITKQ08881 620 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 NIPAL4Q0D2K0 466 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 OLIG2Q13516 323 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 EMC10Q5UCC4 262 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 CASC4Q6P4E1 433 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 ZNF449Q6P9G9 518 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 NPAS3Q8IXF0 933 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 IRF7Q92985 503 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 CFAP36Q96G28 342 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 CINPQ9BW66 212 aaPredicted RBP12.21□□□□□ -0.46
USF1-203ENST00000368021 CAPS2Q9BXY5 557 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 SPHK2Q9NRA0 654 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 SYBUQ9NX95 663 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 MARK1Q9P0L2 795 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 SAMD15Q9P1V8 674 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 CDH7Q9ULB5 785 aa12.21□□□□□ -0.46
USF1-203ENST00000368021 SMIM23A6NLE4 172 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 MUSKO15146 869 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 PMPCBO75439 489 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 CD160O95971 181 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 EPOP01588 193 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 C1QAP02745 245 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 POLBP06746 335 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 CR2P20023 1033 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 GCAP28676 217 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 CD86P42081 329 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 SKOR1P84550 965 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 DSC2Q02487 901 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 TMED1Q13445 227 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 FRG1Q14331 258 aaKnown RBP12.2□□□□□ -0.46
USF1-203ENST00000368021 DENND5AQ6IQ26 1287 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 RETSATQ6NUM9 610 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 METTL3Q86U44 580 aaKnown RBP12.2□□□□□ -0.46
USF1-203ENST00000368021 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 TMEM25Q86YD3 366 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 ADGRG2Q8IZP9 1017 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.2□□□□□ -0.46
USF1-203ENST00000368021 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
USF1-203ENST00000368021 BHMTQ93088 406 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 LMLNQ96KR4 655 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 DHRS4Q9BTZ2 278 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
USF1-203ENST00000368021 KCNK12Q9HB15 430 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 PIH1D1Q9NWS0 290 aaKnown RBP12.2□□□□□ -0.46
USF1-203ENST00000368021 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 MOCS1Q9NZB8 636 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 VPS51Q9UID3 782 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 MYOFQ9NZM1 2061 aa12.2□□□□□ -0.46
USF1-203ENST00000368021 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 DOCK8Q8NF50 2099 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 SNAP91O60641 907 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 USP1O94782 785 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 SERPINF2P08697 491 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 CCT5P48643 541 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 CRADDP78560 199 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 NSUN2Q08J23 767 aaKnown RBP eCLIP12.19□□□□□ -0.46
USF1-203ENST00000368021 LMAN2Q12907 356 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 KBTBD12Q3ZCT8 623 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 ADGRD1Q6QNK2 874 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 PARM1Q6UWI2 310 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 SH2D3CQ8N5H7 860 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 BCAS4Q8TDM0 211 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 FGF14Q92915 247 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 ASB16Q96NS5 453 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 APOL2Q9BQE5 337 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 TRPV4Q9HBA0 871 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 OBP2AQ9NY56 170 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 PSMC3IPQ9P2W1 217 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms