RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ACDQ96AP0 544 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ELSPBP1Q96BH3 223 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 SEMA3CQ99985 751 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 TRIM56Q9BRZ2 755 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 C2orf49Q9BVC5 232 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 CASS4Q9NQ75 786 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 SEPT3Q9UH03 358 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 FCF1Q9Y324 198 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ARNTLO00327 626 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 LIN7AO14910 233 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 RGS16O15492 202 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 PMPCBO75439 489 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ANXA9O76027 345 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SHBGP04278 402 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 MLNP12872 115 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ALADP13716 330 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SP100P23497 879 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ZNF235Q14590 738 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 GEN1Q17RS7 908 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 TRPM8Q7Z2W7 1104 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 RNF135Q8IUD6 432 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 FBXO36Q8NEA4 188 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 EXOC2Q96KP1 924 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 RPL10LQ96L21 214 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 FRMD8Q9BZ67 464 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 XAB2Q9HCS7 855 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 NOP53Q9NZM5 478 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 EPS15L1Q9UBC2 864 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 AAR2Q9Y312 384 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 NEBLO76041 1014 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ACSL3O95573 720 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ADH1CP00326 375 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CHN1P15882 459 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 PSMC3P17980 439 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SLC6A11P48066 632 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 STK19P49842 368 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SERPINH1P50454 418 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 WNT3AP56704 352 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CRADDP78560 199 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ITKQ08881 620 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 PRPSAP1Q14558 356 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 SPRED3Q2MJR0 410 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 PPP1R21Q6ZMI0 780 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CCDC117Q8IWD4 279 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 IPMKQ8NFU5 416 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 UHMK1Q8TAS1 419 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ATP2A3Q93084 1043 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 E2F7Q96AV8 911 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 GUCD1Q96NT3 240 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 NECTIN4Q96NY8 510 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CINPQ9BW66 212 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ROPN1BQ9BZX4 212 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 LRRC40Q9H9A6 602 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ROPN1Q9HAT0 212 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 INTS9Q9NV88 658 aaKnown RBP14.86□□□□□ -0.03
CXCL12-201ENST00000343575 GTSE1Q9NYZ3 720 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 CHMP2BQ9UQN3 213 aa14.86□□□□□ -0.03
CXCL12-201ENST00000343575 ANHXE9PGG2 379 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 TULP3O75386 442 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 ECI2O75521 394 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 NFATC1O95644 943 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 KCNA5P22460 613 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 CCND1P24385 295 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 CHRNA4P43681 627 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 GEMP55040 296 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 MPP3Q13368 585 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 MSLNQ13421 630 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-201ENST00000343575 PDGFRLQ15198 375 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 KDELC2Q7Z4H8 507 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 VPS45Q9NRW7 570 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 THG1LQ9NWX6 298 aaKnown RBP14.85□□□□□ -0.03
CXCL12-201ENST00000343575 BAIAP2L1Q9UHR4 511 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 HS3ST2Q9Y278 367 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 C15orf41Q9Y2V0 281 aa14.85□□□□□ -0.03
CXCL12-201ENST00000343575 CXorf51AA0A1B0GTR3 108 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 CCDC189A1A4V9 331 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SRCP12931 536 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 MGAT1P26572 445 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SSTR1P30872 391 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SESN2P58004 480 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-201ENST00000343575 NSUN2Q08J23 767 aaKnown RBP eCLIP14.84□□□□□ -0.03
CXCL12-201ENST00000343575 HTR4Q13639 388 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 E2F5Q15329 346 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 CCDC38Q502W7 563 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 DGKKQ5KSL6 1271 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 CERCAMQ5T4B2 595 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SFTPA1Q8IWL2 248 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 PHTF2Q8N3S3 785 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 PYROXD1Q8WU10 500 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 TTC17Q96AE7 1141 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 TBL1YQ9BQ87 522 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms