RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 Q6ZSR6 202 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CASKIN2Q8WXE0 1202 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CENPTQ96BT3 561 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 FEM1CQ96JP0 617 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CNDP2Q96KP4 475 aaKnown RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 GDAP1L1Q96MZ0 367 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 LENG8Q96PV6 779 aaPredicted RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CPEB1Q9BZB8 566 aaKnown RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 THAP2Q9H0W7 228 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 TSPAN11A1L157 253 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 YKT6O15498 198 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 TSPAN6O43657 245 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 LDOC1O95751 146 aaPredicted RBP17.26■□□□□ 0.35
BRCC3-202ENST00000340647 PEX11BO96011 259 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 DGKAP23743 735 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 AKT2P31751 481 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 HCAR3P49019 387 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 RHOAP61586 193 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 ZBED6P86452 979 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 ZNF542PQ5EBM4 170 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 KYAT3Q6YP21 454 aaKnown RBP17.26■□□□□ 0.35
BRCC3-202ENST00000340647 OXR1Q8N573 874 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 ASB12Q8WXK4 309 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 RAB7BQ96AH8 199 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 OSBPL1AQ9BXW6 950 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 DKK3Q9UBP4 350 aa17.26■□□□□ 0.35
BRCC3-202ENST00000340647 ANKRD11Q6UB99 2663 aaPredicted RBP17.26■□□□□ 0.35
BRCC3-202ENST00000340647 ACACAQ13085 2346 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 RP1P56715 2156 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 LY6G6EA0A0G2JKS1 128 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 MAGEC1O60732 1142 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PIAS2O75928 621 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 SERPING1P05155 500 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 CYP1A2P05177 515 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 MYBL1P10243 752 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 IL4RP24394 825 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PCK1P35558 622 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PFN3P60673 137 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 SLC25A11Q02978 314 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 DPYSL2Q16555 572 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PPP6R3Q5H9R7 873 aaPredicted RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 NYAP1Q6ZVC0 841 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 POLNQ7Z5Q5 900 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 TTC7BQ86TV6 843 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 ZNF354CQ86Y25 554 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PSTKQ8IV42 348 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 TSEN2Q8NCE0 465 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 FUBP1Q96AE4 644 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 CALN1Q9BXU9 219 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 MBNL1Q9NR56 388 aaKnown RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 UBA2Q9UBT2 640 aaPredicted RBP17.25■□□□□ 0.35
BRCC3-202ENST00000340647 LHX6Q9UPM6 363 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 PCDHGA1Q9Y5H4 931 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 U3KQA8 63 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 ADAMTS20P59510 1910 aa17.25■□□□□ 0.35
BRCC3-202ENST00000340647 SPTY2D1-AS1A0A0U1RR47 76 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 A6NNZ2 444 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 SIGLEC6O43699 453 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 MMP20O60882 483 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 RNF8O76064 485 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 IGSF6O95976 241 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 RARAP10276 462 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 AMPD1P23109 780 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 HNRNPH3P31942 346 aaKnown RBP17.24■□□□□ 0.35
BRCC3-202ENST00000340647 CASP14P31944 242 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 IGFALSP35858 605 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 EIF2B5Q13144 721 aaKnown RBP17.24■□□□□ 0.35
BRCC3-202ENST00000340647 ACAP1Q15027 740 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 CCDC157Q569K6 752 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 NIPA2Q8N8Q9 360 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 TP53I13Q8NBR0 393 aaPredicted RBP17.24■□□□□ 0.35
BRCC3-202ENST00000340647 MDM1Q8TC05 714 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 SUV39H2Q9H5I1 410 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 BZW2Q9Y6E2 419 aaKnown RBP17.24■□□□□ 0.35
BRCC3-202ENST00000340647 SCINQ9Y6U3 715 aa17.24■□□□□ 0.35
BRCC3-202ENST00000340647 MYF5P13349 255 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 ARSEP51690 589 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 SEMG2Q02383 582 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 ASTE1Q2TB18 679 aaPredicted RBP17.23■□□□□ 0.35
BRCC3-202ENST00000340647 INAVAQ3KP66 663 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 TMEM52BQ4KMG9 183 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
BRCC3-202ENST00000340647 PTAR1Q7Z6K3 402 aaPredicted RBP17.23■□□□□ 0.35
BRCC3-202ENST00000340647 PROSER1Q86XN7 944 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 CAMK1DQ8IU85 385 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 FAM71BQ8TC56 605 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 IFT43Q96FT9 208 aa17.23■□□□□ 0.35
BRCC3-202ENST00000340647 TCEAL2Q9H3H9 227 aaPredicted RBP17.23■□□□□ 0.35
BRCC3-202ENST00000340647 MRPL47Q9HD33 250 aaKnown RBP17.23■□□□□ 0.35
BRCC3-202ENST00000340647 TTC24A2A3L6 582 aaPredicted RBP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 ARHGAP42A6NI28 874 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 PRKCGP05129 697 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 CD48P09326 243 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 GM2AP17900 193 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms