RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 KPNA2P52292 529 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 SLC12A2P55011 1212 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 BRMS1LQ5PSV4 323 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 MANEALQ5VSG8 457 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 NEPROQ6NW34 567 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 BEND5Q7L4P6 421 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 PELI3Q8N2H9 469 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 CATSPER1Q8NEC5 780 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 PPP1R2P1Q96PQ5 205 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 PTPN18Q99952 460 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 AP5M1Q9H0R1 490 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 Q9H521 79 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 IGSF5Q9NSI5 407 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 NYNRINQ9P2P1 1898 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 TTC3P53804 2025 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 PRSS51A0A1B0GVH4 220 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 CLGNO14967 610 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 CPB1P15086 417 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 CHRNA4P43681 627 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 RAB27AP51159 221 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 ATXN3P54252 364 aaPredicted RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 MRPS6P82932 125 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 MAP2K5Q13163 448 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 CSHL1Q14406 222 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 MORN1Q5T089 497 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 RBM20Q5T481 1227 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 ARTNQ5T4W7 220 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 TAF2Q6P1X5 1199 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 AGMOQ6ZNB7 445 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 SPPL2BQ8TCT7 592 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 FCRL2Q96LA5 508 aaPredicted RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 UTP6Q9NYH9 597 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 SFMBT1Q9UHJ3 866 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 MRPL42Q9Y6G3 142 aaKnown RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 CRTAMO95727 393 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 CAPNS1P04632 268 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 ODC1P11926 461 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SULT2A1Q06520 285 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SEPT6Q14141 434 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 FAM83EQ2M2I3 478 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 AP1ARQ63HQ0 302 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 GK5Q6ZS86 529 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 CHSY3Q70JA7 882 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SATL1Q86VE3 508 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 LRRTM3Q86VH5 581 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 KLHL32Q96NJ5 620 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 PKP2Q99959 881 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 MRPL1Q9BYD6 325 aaKnown RBP15.37■□□□□ 0.05
DDX56-201ENST00000258772 PRKD2Q9BZL6 878 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 GIT1Q9Y2X7 761 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 COMMD3-BMI1R4GMX3 469 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 MIA3Q5JRA6 1907 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SMIM31A0A1B0GVY4 71 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 KCNU1A8MYU2 1149 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 M0QZ92 97 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SMIM18P0DKX4 95 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 TCN1P20061 433 aaPredicted RBP15.37■□□□□ 0.05
DDX56-201ENST00000258772 KCNA5P22460 613 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 CCR1P32246 355 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 HTR7P34969 479 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 PTK2BQ14289 1009 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 PAN2Q504Q3 1202 aaKnown RBP15.37■□□□□ 0.05
DDX56-201ENST00000258772 ZNF789Q5FWF6 425 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 TECRLQ5HYJ1 363 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 BTBD8Q5XKL5 378 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 TIGD7Q6NT04 549 aaPredicted RBP15.37■□□□□ 0.05
DDX56-201ENST00000258772 KIAA0408Q6ZU52 694 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 SPNS2Q8IVW8 549 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 FAM156AQ8NDB6 213 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 NAT14Q8WUY8 206 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 OLFM1Q99784 485 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 EPB41L1Q9H4G0 881 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 ABCC13Q9NSE7 274 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 NDUFA13Q9P0J0 144 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 FIS1Q9Y3D6 152 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 AP4B1Q9Y6B7 739 aa15.37■□□□□ 0.05
DDX56-201ENST00000258772 TRIM38O00635 465 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 MSI1O43347 362 aaKnown RBP15.36■□□□□ 0.05
DDX56-201ENST00000258772 PGM3O95394 542 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 BRCC3P46736 316 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PSME3P61289 254 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
DDX56-201ENST00000258772 PFKPQ01813 784 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 SPATA24Q86W54 205 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 METTL23Q86XA0 190 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 RNF135Q8IUD6 432 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 FAR2Q96K12 515 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 TMEM209Q96SK2 561 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 NDNQ99608 321 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PKMYT1Q99640 499 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 CYP4F12Q9HCS2 524 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 VCX3AQ9NNX9 186 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 ADA2Q9NZK5 511 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PCDHGB4Q9UN71 923 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PCDHGB5Q9Y5G0 923 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PCDHGA7Q9Y5G6 932 aa15.36■□□□□ 0.05
DDX56-201ENST00000258772 PTPRDP23468 1912 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms