RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm20671F6TVX7 576 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Atp2a2O55143 1044 aaKnown RBP14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Syn1O88935 706 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 PdgfrbP05622 1098 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Slc7a2P18581 657 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 PenkP22005 268 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Serpina3cP29621 417 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Wfs1P56695 890 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Casp4P70343 373 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Irx1P81068 480 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Acsbg2Q2XU92 667 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Tnks2Q3UES3 1166 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Adad1Q5SUE7 619 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ip6k1Q6PD10 433 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ccnt2Q7TQK0 723 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Msantd1Q8BIL2 278 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Slc6a17Q8BJI1 727 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Tarsl2Q8BLY2 790 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Krt222Q8CCX5 294 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Gimap4Q99JY3 219 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Dhrs1Q99L04 313 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 St13Q99L47 371 aaKnown RBP14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Mrps18aQ99N85 196 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 XpotQ9CRT8 963 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 ArpinQ9D0A3 226 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Lonp2Q9DBN5 852 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Adam21Q9JI76 729 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Herpud2Q9JJC9 404 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 NagaQ9QWR8 415 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Cog1Q9Z160 980 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Myo10F8VQB6 2062 aa14.87□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Olfr271-ps1A0A1L1SQH2 283 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Fam171a2A2A699 822 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Gm7714E9Q079 131 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ly6aP05533 134 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Cdh1P09803 884 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 CryaaP24622 196 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Hspa9P38647 679 aaKnown RBP14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Igfbp2P47877 305 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Psen1P49769 467 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Slc12a2P55012 1205 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Arl4cP61208 192 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 UtyP79457 1212 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Cd80Q00609 306 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Nhlh1Q02576 133 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Nt5dc3Q3UHB1 546 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Q3UTZ3 580 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 PapolaQ61183 739 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Fam167aQ6P1G6 215 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Dclk2Q6PGN3 756 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Olfr855Q7TRF8 312 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Olfr366Q7TRY4 309 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Kxd1Q80XH1 177 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Fbxo46Q8BG80 603 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Sfr1Q8BP27 319 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Hectd2Q8CDU6 774 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Olfr371Q8VGB8 312 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Mlc1Q8VHK5 382 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Eif3hQ91WK2 352 aaKnown RBP14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 LipfQ9CPP7 395 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Acot13Q9CQR4 140 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Trpc4Q9QUQ5 974 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 TrioQ0KL02 3102 aa14.86□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ankfn1A0A140LIW7 1083 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 JrklB2RRL2 523 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Adamtsl5D3Z689 485 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Mroh5E9PUJ8 762 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Pias3O54714 628 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Stx7O70439 261 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Aff1O88573 1216 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ltb4rO88855 351 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 P01807 119 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 TecP24604 630 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ap1s1P61967 158 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Snrpd1P62315 119 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Igsf9Q05BQ1 1179 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Rgs9bpQ148R9 237 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Mfsd3Q5U419 412 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Pnpla2Q8BJ56 486 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ppfia2Q8BSS9 1257 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Zfp62Q8C827 914 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Fem1cQ8CEF1 617 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Pnpt1Q8K1R3 783 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Spag16Q8K450 639 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Pdik1lQ8QZR7 341 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 HnrnplQ8R081 586 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 GrpQ8R1I2 146 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Lrrc42Q8R2U7 421 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Med17Q8VCD5 649 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 AmotQ8VHG2 1126 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Tmem168Q91VX9 697 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Nrif1Q923B3 828 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Ndufa10Q99LC3 355 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Bcl7aQ9CXE2 210 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Rpn2Q9DBG6 631 aaKnown RBP14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Cyb561d2Q9WUE3 222 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Insl5Q9WUG6 135 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Cldn3Q9Z0G9 219 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Rps6kb2Q9Z1M4 485 aa14.85□□□□□ -0.03
Ercc1-201ENSMUST00000003645 Zfp811A0A0J9YU71 552 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms