RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PLPPR4Q7Z2D5 763 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PIWIL4Q7Z3Z4 852 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 GATAD2AQ86YP4 633 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 AMER2Q8N7J2 671 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 AHCYL2Q96HN2 611 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 TEKT5Q96M29 485 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 MBOAT7Q96N66 472 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 S100A13Q99584 98 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 CCNB1P14635 433 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PTPN1P18031 435 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 CD86P42081 329 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 MAPKAPK2P49137 400 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ENPEPQ07075 957 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LSM12Q3MHD2 195 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 NAIF1Q69YI7 327 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 RINLQ6ZS11 566 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GPRIN3Q6ZVF9 776 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RIOX2Q8IUF8 465 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 XRN1Q8IZH2 1706 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 CSGALNACT1Q8TDX6 532 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 VMP1Q96GC9 406 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZYG11BQ9C0D3 744 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 C3orf18Q9UK00 162 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RAP2CQ9Y3L5 183 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 COMMD3-BMI1R4GMX3 469 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 MST1RQ04912 1400 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 URADA6NGE7 173 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GLRA2P23416 452 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 KLRC2P26717 231 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GRIA4P48058 902 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 UGT2B15P54855 530 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PTSQ03393 145 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 AAGABQ6PD74 315 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 VN1R5Q7Z5H4 357 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SH3RF1Q7Z6J0 888 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZNF483Q8TF39 744 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 SLC47A1Q96FL8 570 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RNPEPQ9H4A4 650 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ALG9Q9H6U8 611 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PIK3C2AO00443 1686 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RECQL4O94761 1208 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 OR6B1O95007 311 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FGF1P05230 155 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TNNI3P19429 210 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LGALS3BPQ08380 585 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SMARCB1Q12824 385 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PRAMEF18Q5VWM3 479 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GJD3Q8N144 294 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 POMGNT2Q8NAT1 580 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZSCAN18Q8TBC5 510 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 CXorf40AQ8TE69 158 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 UBASH3BQ8TF42 649 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZNF607Q96SK3 696 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 MTFR1LQ9H019 292 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LRMDAQ9H2I8 198 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 AKAP7Q9P0M2 348 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 OR12D3Q9UGF7 316 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TBC1D30Q9Y2I9 924 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RBM47A0AV96 593 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 ANKDD1BA6NHY2 528 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 MSCO60682 206 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LGALS2P05162 132 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 S100GP29377 79 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZNF671Q8TAW3 534 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 HASPINQ8TF76 798 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PRCCQ92733 491 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 SMAD5Q99717 465 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 TIMMDC1Q9NPL8 285 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 BLOC1S4Q9NUP1 217 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 EHD3Q9NZN3 535 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RCOR3Q9P2K3 495 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 SLC9A8Q9Y2E8 581 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 BTBD3Q9Y2F9 522 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PTCH2Q9Y6C5 1203 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 DDTLA6NHG4 134 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 CBX6O95503 412 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 POMCP01189 267 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ENO2P09104 434 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 ALOX5P09917 674 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TPH1P17752 444 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 AKAP5P24588 427 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ADRA1DP25100 572 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ATP5C1P36542 298 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 SULT2A1Q06520 285 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RGS1Q08116 209 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SPATA19Q7Z5L4 167 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ZSWIM2Q8NEG5 633 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 KAZALD1Q96I82 304 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GRIP2Q9C0E4 1043 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ARMCX1Q9P291 453 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 IKZF3Q9UKT9 509 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TRAFD1O14545 582 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 HGFP14210 728 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SLC26A3P40879 764 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PTDSS1P48651 473 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 PDK3Q15120 406 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MARK2Q7KZI7 788 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 BNIPLQ7Z465 357 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CDH24Q86UP0 819 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms