RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZSCAN30Q86W11 494 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 PCDH20Q8N6Y1 951 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 OR7D4Q8NG98 312 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 OR8K1Q8NGG5 319 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 JOSD2Q8TAC2 188 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 GRIN3AQ8TCU5 1115 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 BMFQ96LC9 184 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 FCRL3Q96P31 734 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 TNKS2Q9H2K2 1166 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 USP29Q9HBJ7 922 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 TAS2R14Q9NYV8 317 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 SCAMP1O15126 338 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 FFAR2O15552 330 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 AP1G1O43747 822 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 OPA1O60313 960 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 ADRB3P13945 408 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 ITGB7P26010 798 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 HNRNPH3P31942 346 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNF143P52747 638 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 RPS21P63220 83 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 TLE3Q04726 772 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 C19orf57Q0VDD7 668 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 CDO1Q16878 200 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 TRNP1Q6NT89 227 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 KYAT3Q6YP21 454 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 FAM131BQ86XD5 332 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 SLC39A7Q92504 469 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 CENPIQ92674 756 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 APOLD1Q96LR9 279 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 MCEEQ96PE7 176 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 DUSP23Q9BVJ7 150 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 SLC17A9Q9BYT1 436 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 ISCUQ9H1K1 167 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 MRPL47Q9HD33 250 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 TMPRSS4Q9NRS4 437 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 PPARGC1AQ9UBK2 798 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 FADS3Q9Y5Q0 445 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
SHKBP1-203ENST00000594298 ARID1BQ8NFD5 2236 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 LY6G6EA0A0G2JKS1 128 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 TCRBV5S1A1TA0A578 114 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 LZTS3O60299 673 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 DXOO77932 396 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 GJB6O95452 261 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 L1CAMP32004 1257 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 ARF5P84085 180 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 MAMLD1Q13495 774 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 FGL2Q14314 439 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 C15orf59Q2T9L4 293 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 CARD16Q5EG05 197 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 TMC6Q7Z403 805 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 PLPP6Q8IY26 295 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 FAM172AQ8WUF8 416 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 FEM1CQ96JP0 617 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNF578Q96N58 590 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 DEPDC7Q96QD5 511 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 HEPHQ9BQS7 1158 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 CNPY3Q9BT09 278 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 SPON2Q9BUD6 331 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 ZYG11BQ9C0D3 744 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 ATP13A1Q9HD20 1204 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 EVA1BQ9NVM1 165 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 CNOT8Q9UFF9 292 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 PCDHB1Q9Y5F3 818 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 U3KQA8 63 aa17.84■□□□□ 0.45
SHKBP1-203ENST00000594298 SPTY2D1-AS1A0A0U1RR47 76 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 TEX51A0A1B0GUA7 166 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 K7ESM1 405 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 RIOK3O14730 519 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 SRGAP2O75044 1071 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 C1QL1O75973 258 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 CSF2P04141 144 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 ADRA1BP35368 520 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 DUSP3P51452 185 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 GNA12Q03113 381 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 FZD2Q14332 565 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 GPR155Q7Z3F1 870 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 PTAR1Q7Z6K3 402 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 CNGA4Q8IV77 575 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 SPACA3Q8IXA5 215 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 LSMEM2Q8N112 164 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF248Q8NDW4 579 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF653Q96CK0 615 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 HIC2Q96JB3 615 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 LENG8Q96PV6 779 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 DNAJC7Q99615 494 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 RBSNQ9H1K0 784 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 CAAP1Q9H8G2 361 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 DNAJC28Q9NX36 388 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 CSNK1G3Q9Y6M4 447 aa17.83■□□□□ 0.44
SHKBP1-203ENST00000594298 POM121BA6NF01 834 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 RAD51BO15315 384 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 CD160O95971 181 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 PAK4O96013 591 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 PRB1P04280 392 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 NME1P15531 152 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 RABIFP47224 123 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms