RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 FAM84BQ96KN1 310 aaPredicted RBP2.54□□□□□ -2
RPRD1A-210ENST00000591994 SF3B5Q9BWJ5 86 aaKnown RBP2.54□□□□□ -2
RPRD1A-210ENST00000591994 MRPL44Q9H9J2 332 aaKnown RBP2.54□□□□□ -2
RPRD1A-210ENST00000591994 VEZTQ9HBM0 779 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 ENTPD7Q9NQZ7 604 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 TXLNGQ9NUQ3 528 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 IL1RAPL1Q9NZN1 696 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 PNMA2Q9UL42 364 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 PCDHA12Q9UN75 941 aa2.54□□□□□ -2
RPRD1A-210ENST00000591994 TMEM272A0A1B0GTI8 110 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 GAGE10A6NGK3 116 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 IFNL4K9M1U5 179 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TNFSF14O43557 240 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SLC25A17O43808 307 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 RTN3O95197 1032 aaPredicted RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 EPN2O95208 641 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TNFRSF1BP20333 461 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SLC16A2P36021 539 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 MLH1P40692 756 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 POLD2P49005 469 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 HARS2P49590 506 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 CCR9P51686 369 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 UFM1P61960 85 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SLC18A2Q05940 514 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SIM2Q14190 667 aaPredicted RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 INPP5JQ15735 1006 aaPredicted RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 TSTQ16762 297 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 ODF3L2Q3SX64 289 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 R3HCC1LQ7Z5L2 792 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 FAM217AQ8IXS0 508 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 DCP1BQ8IZD4 617 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 ZCCHC10Q8TBK6 192 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 UCMAQ8WVF2 138 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SKA1Q96BD8 255 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 LHPPQ9H008 270 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 UNC45AQ9H3U1 944 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TASP1Q9H6P5 420 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 MAP6D1Q9H9H5 199 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SNTG1Q9NSN8 517 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 HCN3Q9P1Z3 774 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 HSPB7Q9UBY9 170 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 FBXO40Q9UH90 709 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SARDHQ9UL12 918 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 PROCRQ9UNN8 238 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 CLDN16Q9Y5I7 305 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TTC3P53804 2025 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 GOLGA6L10A0A0M3HER8 536 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TSPAN4O14817 238 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 LDLRAD4O15165 306 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 RNMTO43148 476 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 SLC28A2O43868 658 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TACC1O75410 805 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 NDUFB8O95169 186 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 FGF2P09038 288 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 DDIT3P35638 169 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 GEMIN4P57678 1058 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 PTP4A2Q12974 167 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 EDRF1Q3B7T1 1238 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 SLC9B1Q4ZJI4 515 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 FAAH2Q6GMR7 532 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 CAPRIN2Q6IMN6 1127 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 TMEM71Q6P5X7 295 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TMEM81Q6P7N7 255 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 IL20RBQ6UXL0 311 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 PRSS45Q7RTY3 260 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 FAM160B2Q86V87 743 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 CNTROBQ8N137 903 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 RBMXL3Q8N7X1 1067 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 PPHLN1Q8NEY8 458 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 OR4N2Q8NGD1 307 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 NFKBIDQ8NI38 313 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 NUF2Q9BZD4 464 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 WDR6Q9NNW5 1121 aaKnown RBP2.53□□□□□ -2
RPRD1A-210ENST00000591994 PCDHB16Q9NRJ7 776 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 RNF146Q9NTX7 359 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 IRAK4Q9NWZ3 460 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 CTNNAL1Q9UBT7 734 aa2.53□□□□□ -2
RPRD1A-210ENST00000591994 TEX13CA0A0J9YWL9 993 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 FAM157AC9JC47 383 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 GTPBP1O00178 669 aaKnown RBP2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 CLDN7O95471 211 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 GALTP07902 379 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 NGFRP08138 427 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 YWHAQP27348 245 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 EPHA8P29322 1005 aaPredicted RBP2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 BLKP51451 505 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 EGR4Q05215 589 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 C9orf50Q5SZB4 431 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 SERPINA11Q86U17 422 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 CADM3Q8N126 398 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 KDM1BQ8NB78 822 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 TMEM174Q8WUU8 243 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 RFFLQ8WZ73 363 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 CENPIQ92674 756 aaPredicted RBP2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 KLHL15Q96M94 604 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 POLDIP3Q9BY77 421 aaKnown RBP2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 B3GNT4Q9C0J1 378 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 UBA5Q9GZZ9 404 aa2.52□□□□□ -2.01
RPRD1A-210ENST00000591994 HIF1ANQ9NWT6 349 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms