RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 HPCAL4Q9UM19 191 aa12.57□□□□□ -0.4
POLR2A-202ENST00000573603 NEU3Q9UQ49 428 aa12.57□□□□□ -0.4
POLR2A-202ENST00000573603 TSPAN6O43657 245 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 C1QL1O75973 258 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 GSRP00390 522 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 EEF1GP26641 437 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 IGFALSP35858 605 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 THOP1P52888 689 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 POLR2FP61218 127 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 SNRPD1P62314 119 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 NRG1Q02297 640 aaPredicted RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 EIF2B5Q13144 721 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 ZNF248Q8NDW4 579 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 OR2AP1Q8NGE2 309 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 RAB7BQ96AH8 199 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 ISG20Q96AZ6 181 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 C1QTNF2Q9BXJ5 285 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 MAGEH1Q9H213 219 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 VPS16Q9H269 839 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 TCEAL2Q9H3H9 227 aaPredicted RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 SYNDIG1Q9H7V2 258 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 USP29Q9HBJ7 922 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 FAM207AQ9NSI2 230 aaPredicted RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
POLR2A-202ENST00000573603 APOBEC3BQ9UH17 382 aaKnown RBP12.56□□□□□ -0.4
POLR2A-202ENST00000573603 C2CD4BA6NLJ0 364 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 EPHB6O15197 1021 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 BUB1O43683 1085 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 TMCC1O94876 653 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 ZIC2O95409 532 aaPredicted RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PLEKP08567 350 aaPredicted RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 CHRNB2P17787 502 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 TGM2P21980 687 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 SOX5P35711 763 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PTPN9P43378 593 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 HDAC4P56524 1084 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PFN3P60673 137 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 C1orf61Q13536 156 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 NR0B2Q15466 257 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 TCEA2Q15560 299 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PRRT3Q5FWE3 981 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 GDPD4Q6W3E5 623 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 STRADAQ7RTN6 431 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PHACTR4Q8IZ21 702 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PYROXD2Q8N2H3 581 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 DENND6BQ8NEG7 585 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 GDAP1L1Q96MZ0 367 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 ZNF578Q96N58 590 aaPredicted RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 LENG8Q96PV6 779 aaPredicted RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 WRAP53Q9BUR4 548 aaKnown RBP12.55□□□□□ -0.4
POLR2A-202ENST00000573603 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 OSBPL1AQ9BXW6 950 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 CSNK1G3Q9Y6M4 447 aa12.55□□□□□ -0.4
POLR2A-202ENST00000573603 PTPRQQ9UMZ3 2332 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 TEX51A0A1B0GUA7 166 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 MUSKO15146 869 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 KDELR3O43731 214 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 MMP20O60882 483 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
POLR2A-202ENST00000573603 IGSF6O95976 241 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 KRT3P12035 628 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 ITIH2P19823 946 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 GPD1P21695 349 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 NSFP46459 744 aaKnown RBP12.54□□□□□ -0.4
POLR2A-202ENST00000573603 KRT31Q15323 416 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 ISXQ2M1V0 245 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 BROXQ5VW32 411 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 TRIM72Q6ZMU5 477 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 TTC7BQ86TV6 843 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 BTN2A2Q8WVV5 523 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 KCNE4Q8WWG9 221 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 VOPP1Q96AW1 172 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 ARHGEF26Q96DR7 871 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 VCPIP1Q96JH7 1222 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 EXOC2Q96KP1 924 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 EPAS1Q99814 870 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR2A-202ENST00000573603 LRRC61Q9BV99 259 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 CPNE5Q9HCH3 593 aa12.54□□□□□ -0.4
POLR2A-202ENST00000573603 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
POLR2A-202ENST00000573603 SPASTQ9UBP0 616 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms