RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-215	ENST00000558868	EPN3	Q9H201	632 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	NKX2-4	Q9H2Z4	354 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	SFXN1	Q9H9B4	322 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	SCUBE2	Q9NQ36	999 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	SMYD2	Q9NRG4	433 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	MRPS23	Q9Y3D9	190 aa	Known RBP	13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	OR51B4	Q9Y5P0	310 aa		13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	HELZ	P42694	1942 aa	Known RBP	13.95	□□□□□ -0.18
TPM1-215	ENST00000558868	ZCWPW2	A0A1B0GU75	182 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	TRIM49D1	C9J1S8	452 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	ZMPSTE24	O75844	475 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	ZWINT	O95229	277 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	PAPSS2	O95340	614 aa	Predicted RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	ALAD	P13716	330 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	KRT4	P19013	534 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	MZF1	P28698	734 aa	Predicted RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	GP5	P40197	560 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	CSK	P41240	450 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	PLK1	P53350	603 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	ILF2	Q12905	390 aa	Known RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	USP4	Q13107	963 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	CYTH1	Q15438	398 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	SEPT7	Q16181	437 aa	Known RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	TTC19	Q6DKK2	380 aa	Predicted RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	TIFAB	Q6ZNK6	161 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	KCNMB4	Q86W47	210 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	SLC25A41	Q8N5S1	370 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	ANKRD42	Q8N9B4	389 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	GBF1	Q92538	1859 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	FCRL3	Q96P31	734 aa	Predicted RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	PBX4	Q9BYU1	374 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	CCDC134	Q9H6E4	229 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	SLC28A3	Q9HAS3	691 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	CHRAC1	Q9NRG0	131 aa		13.94	□□□□□ -0.18
TPM1-215	ENST00000558868	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.94	□□□□□ -0.18
TPM1-215	ENST00000558868		A0A1W2PPM1	405 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	GMNC	A6NCL1	334 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SCAMP3	O14828	347 aa	Known RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	MUSK	O15146	869 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	TM9SF1	O15321	606 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	TMCC1	O94876	653 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	NDST3	O95803	873 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	GLDC	P23378	1020 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SPR	P35270	261 aa	Predicted RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	PBX2	P40425	430 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	HADHA	P40939	763 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	MAPK8	P45983	427 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	NRIP1	P48552	1158 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	CSE1L	P55060	971 aa	Known RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ARF5	P84085	180 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	IL9R	Q01113	521 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SLC18A2	Q05940	514 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SEPT6	Q14141	434 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	POU6F1	Q14863	301 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ZNF77	Q15935	545 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	UGP2	Q16851	508 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SLC5A9	Q2M3M2	681 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	FSCB	Q5H9T9	825 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ZNF697	Q5TEC3	545 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	CES3	Q6UWW8	571 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	PACS1	Q6VY07	963 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	TPGS1	Q6ZTW0	290 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ADGRD2	Q7Z7M1	963 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	C4orf33	Q8N1A6	199 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	CELF5	Q8N6W0	485 aa	Known RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ACMSD	Q8TDX5	336 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	PEX13	Q92968	403 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	ALG14	Q96F25	216 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	TRIM56	Q9BRZ2	755 aa	Known RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	SMG9	Q9H0W8	520 aa	Known RBP	13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	VPS51	Q9UID3	782 aa		13.93	□□□□□ -0.18
TPM1-215	ENST00000558868	NRG2	O14511	850 aa	Predicted RBP	13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	TIMM44	O43615	452 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	TYROBP	O43914	113 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	PIAS1	O75925	651 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	ERVK-10	P10266	1014 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	CREB1	P16220	341 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	CR2	P20023	1033 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	NMBR	P28336	390 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	SCNN1B	P51168	640 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	RHOA	P61586	193 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	NTHL1	P78549	312 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	THOC5	Q13769	683 aa	Known RBP	13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	DMC1	Q14565	340 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	SIRPB2	Q5JXA9	342 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	TEDDM1	Q5T9Z0	273 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	KDELC2	Q7Z4H8	507 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	TAX1BP1	Q86VP1	789 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	DEFB123	Q8N688	67 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	BANP	Q8N9N5	519 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	CALML6	Q8TD86	181 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	MGARP	Q8TDB4	240 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	MFSD3	Q96ES6	412 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	APOPT1	Q96IL0	206 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	GDF15	Q99988	308 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	FAM167B	Q9BTA0	163 aa		13.92	□□□□□ -0.18
TPM1-215	ENST00000558868	ADGRE3	Q9BY15	652 aa		13.92	□□□□□ -0.18

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