RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CAAP1Q9H8G2 361 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 POLG2Q9UHN1 485 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 NUP98P52948 1817 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 KCNU1A8MYU2 1149 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 UBDO15205 165 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 FGF18O76093 207 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 ANXA5P08758 320 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 SLC11A1P49279 550 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 AGKQ53H12 422 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 DNAJB7Q7Z6W7 309 aaPredicted RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 ISM1B1AKI9 464 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 RHOQP17081 205 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 SKIV2L2P42285 1042 aaKnown RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 CTBP1Q13363 440 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 GRM3Q14832 879 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 TAF5Q15542 800 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 TRIP4Q15650 581 aaPredicted RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 LDLRAD1Q5T700 205 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 TPGS2Q68CL5 300 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 SH3RF2Q8TEC5 729 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 EME1Q96AY2 570 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 NTPCRQ9BSD7 190 aaKnown RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 UBR2Q8IWV8 1755 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 MYADML2A6NDP7 307 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 SLCO1B7G3V0H7 640 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CD3EAPO15446 510 aaKnown RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 MAGEC1O60732 1142 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ADRA1DP25100 572 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 PWP1Q13610 501 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 FLOT2Q14254 428 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 RAVER1Q8IY67 606 aaKnown RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 AGGF1Q8N302 714 aaeCLIP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ANKRD7Q92527 254 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ZNF516Q92618 1163 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 MYO1CO00159 1063 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 LTA4HP09960 611 aaKnown RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CDH2P19022 906 aaPredicted RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 DAOAP59103 153 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 MED21Q13503 144 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 AUHQ13825 339 aaKnown RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CNGA3Q16281 694 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ZNF655Q8N720 491 aaPredicted RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CNDP1Q96KN2 507 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ABCG4Q9H172 646 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CNTN3Q9P232 1028 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 YIPF1Q9Y548 306 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 M0R2N6 131 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 THRAP10827 490 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 GLOD4Q9HC38 313 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ABCB8Q9NUT2 735 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ADGRA3Q8IWK6 1321 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 TPST1O60507 370 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ZNF682O95780 498 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 ACTN3Q08043 901 aaPredicted RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CYTH1Q15438 398 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 PAGE2BQ5JRK9 111 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CYP4X1Q8N118 509 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CDV3Q9UKY7 258 aaKnown RBP17.49■□□□□ 0.39
PTPN21-208ENST00000556564 TRBV23OR9-2A0A075B6M9 112 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 SCAMP1O15126 338 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 TBX18O95935 607 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 FGF1P05230 155 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 CSF2RAP15509 400 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 PLEKHA7Q6IQ23 1121 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 SUSD3Q96L08 255 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 DACH2Q96NX9 599 aa17.49■□□□□ 0.39
PTPN21-208ENST00000556564 KPNA5O15131 536 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 GDI1P31150 447 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 CERCAMQ5T4B2 595 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 LRRC39Q96DD0 335 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 IMP3Q9NV31 184 aaKnown RBP17.48■□□□□ 0.39
PTPN21-208ENST00000556564 MRPS17Q9Y2R5 130 aaKnown RBP17.48■□□□□ 0.39
PTPN21-208ENST00000556564 RNF225M0QZC1 329 aaPredicted RBP17.48■□□□□ 0.39
PTPN21-208ENST00000556564 TRIM13O60858 407 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 PIAS1O75925 651 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 SERPINE1P05121 402 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 PFKMP08237 780 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 GCKP35557 465 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 ATXN1P54253 815 aaKnown RBP17.48■□□□□ 0.39
PTPN21-208ENST00000556564 CDK16Q00536 496 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 COLGALT2Q8IYK4 626 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 KLQ9UEF7 1012 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 RASGRP1O95267 797 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 JAM2P57087 298 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 DSC2Q02487 901 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 TRIM4Q9C037 500 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 STARD13Q9Y3M8 1113 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 YJEFN3A6XGL0 299 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 E7ENQ6 273 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 HNF4AP41235 474 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 GNA12Q03113 381 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 ILF2Q12905 390 aaKnown RBP17.48■□□□□ 0.39
PTPN21-208ENST00000556564 INPPL1O15357 1258 aa17.48■□□□□ 0.39
PTPN21-208ENST00000556564 MAT2AP31153 395 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms