RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DENRO43583 198 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 TBX18O95935 607 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 SAT1P21673 171 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 MTTPP55157 894 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 COG7P83436 770 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CTXN3Q4LDR2 81 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 KLHL35Q6PF15 583 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ARHGAP12Q8IWW6 846 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CEP70Q8NHQ1 597 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TRIM62Q9BVG3 475 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 SMOC2Q9H3U7 446 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 Q9H521 79 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CAB39LQ9H9S4 337 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 GMIPQ9P107 970 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CCDC160A6NGH7 325 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 CBFA2T3O75081 653 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 PMPCBO75439 489 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 PDE5AO76074 875 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 EOMESO95936 686 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 BPGMP07738 259 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CNTFP26441 200 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 NMBRP28336 390 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 GP5P40197 560 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 DSC1Q08554 894 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 EFEMP1Q12805 493 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 NADK2Q4G0N4 442 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 PDCD4Q53EL6 469 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 FASTKD1Q53R41 847 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 ATG16L1Q676U5 607 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TTC7BQ86TV6 843 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 MIB1Q86YT6 1006 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 DCLK2Q8N568 766 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CAPNS2Q96L46 248 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 NEU3Q9UQ49 428 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 KANSL1LA0AUZ9 987 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 E9PAM4 449 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 KLF11O14901 512 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TRMUO75648 421 aaKnown RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 INHAP05111 366 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 PGGT1BP53609 377 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CDK18Q07002 472 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 POU6F1Q14863 301 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 BRMS1LQ5PSV4 323 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 GRAMD4Q6IC98 578 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 TIFABQ6ZNK6 161 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 Q6ZNX1 250 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CYS1Q717R9 158 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ZNF419Q96HQ0 510 aaPredicted RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 C20orf27Q9GZN8 174 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 CATSPERBQ9H7T0 1116 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ZNHIT2Q9UHR6 403 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 EMCNQ9ULC0 261 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 ZCWPW2A0A1B0GU75 182 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 LYPLA1O75608 230 aaPredicted RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 ENO1P06733 434 aaKnown RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 HOXD10P28358 340 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 CPA2P48052 419 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ZNF135P52742 658 aaPredicted RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 FOLH1Q04609 750 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 STX3Q13277 289 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 DLG2Q15700 870 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 DBF4BQ8NFT6 615 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 APBB2Q92870 758 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 VAT1Q99536 393 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 FICDQ9BVA6 458 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 GPR62Q9BZJ7 368 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 INIPQ9NRY2 104 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 RBM22Q9NW64 420 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP35-207ENST00000530546 SIRPGQ9P1W8 387 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ARMCX1Q9P291 453 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 SH3PXD2BA1X283 911 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 CPB1P15086 417 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 CYP2C18P33260 490 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 PATL1Q86TB9 770 aaKnown RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 AHI1Q8N157 1196 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 SCML4Q8N228 414 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 ZSCAN18Q8TBC5 510 aaPredicted RBP11.69□□□□□ -0.54
USP35-207ENST00000530546 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 SEPT5Q99719 369 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms