RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IGLV3-25P01717 112 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 VDRP11473 427 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ABL2P42684 1182 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 KRT83P78385 493 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 B4GALNT1Q00973 533 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 SLC39A14Q15043 492 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ALG11Q2TAA5 492 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ATP1A1-AS1Q5TC04 95 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 FAM173BQ6P4H8 233 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 C22orf39Q6P5X5 142 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 OGFOD3Q6PK18 319 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 PIM3Q86V86 326 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 SFTPA2Q8IWL1 248 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 CCDC13Q8IYE1 715 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ATP6V0D2Q8N8Y2 350 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ART4Q93070 314 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 MOCOSQ96EN8 888 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 TMX3Q96JJ7 454 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 RPRD1AQ96P16 312 aaPredicted RBP14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 HAPLN3Q96S86 360 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 DDA1Q9BW61 102 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 MIS12Q9H081 205 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 MBNL1Q9NR56 388 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 LRIT1Q9P2V4 623 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 PILRAQ9UKJ1 303 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 ITM2BQ9Y287 266 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 TBC1D30Q9Y2I9 924 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 LOC101059948A0A1B0GTJ6 334 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 TOR1BO14657 336 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 B4GAT1O43505 415 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 ZNF821O75541 412 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 LDLRP01130 860 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 CLCN6P51797 869 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 STK4Q13043 487 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 EIF4EBP2Q13542 120 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 ARHGEF7Q14155 803 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 EIF2S3LQ2VIR3 472 aaKnown RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 LINGO4Q6UY18 593 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 NYAP1Q6ZVC0 841 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 INTS8Q75QN2 995 aaKnown RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 KIAA1143Q96AT1 154 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 NUDT22Q9BRQ3 303 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 MUC3BQ9H195 1237 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 DKK3Q9UBP4 350 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 KCTD3Q9Y597 815 aa14.08□□□□□ -0.16
NKX3-1-202ENST00000523261 IGHV5-10-1A0A0J9YXX1 117 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 NEMP1O14524 444 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 NUDT21O43809 227 aaKnown RBP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 ENDOD1O94919 500 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 RASGRP1O95267 797 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 TRUB2O95900 331 aaKnown RBP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 PITX1P78337 314 aaPredicted RBP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 MC1RQ01726 317 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 ENPEPQ07075 957 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 CUL4BQ13620 913 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 HLTFQ14527 1009 aaKnown RBP eCLIP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 C14orf28Q4W4Y0 310 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 KRT39Q6A163 491 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 RD3Q7Z3Z2 195 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 UNC5BQ8IZJ1 945 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 FBXL13Q8NEE6 735 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 STARD8Q92502 1023 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 RAB7BQ96AH8 199 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 TCTN2Q96GX1 697 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 HSFY1Q96LI6 401 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 CCDC74BQ96LY2 380 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 HEPHQ9BQS7 1158 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 EFHD1Q9BUP0 239 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 ASPSCR1Q9BZE9 553 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 RAB20Q9NX57 234 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 ERRFI1Q9UJM3 462 aaPredicted RBP14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 MAP4K5Q9Y4K4 846 aa14.07□□□□□ -0.16
NKX3-1-202ENST00000523261 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 CLDN11O75508 207 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 PDGFAP04085 211 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 PDIA4P13667 645 aaKnown RBP14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 PRF1P14222 555 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 TCN2P20062 427 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 PDCP20941 246 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 PEX5P50542 639 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 AUHQ13825 339 aaKnown RBP14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 ZC3H18Q86VM9 953 aaKnown RBP14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 TP53I13Q8NBR0 393 aaPredicted RBP14.06□□□□□ -0.16
NKX3-1-202ENST00000523261 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms