RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TGM1P22735 817 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 ARL3P36405 182 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TXKP42681 527 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 NRIP1P48552 1158 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 POLD2P49005 469 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 NXPH1P58417 271 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CXADRP78310 365 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CSTF1Q05048 431 aaKnown RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 MAMLD1Q13495 774 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 KCNJ12Q14500 433 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC45A4Q5BKX6 768 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CBWD5Q5RIA9 395 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 DEPDC1Q5TB30 811 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 HAUS3Q68CZ6 603 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3GQ6DHY5 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SNRNP48Q6IEG0 339 aaKnown RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3CQ6IPX1 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 MTHFD1LQ6UB35 978 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3Q8IZP1 549 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 MYOCDQ8IZQ8 938 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 OR8H2Q8N162 312 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM132CQ8N3T6 1108 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 FAM71DQ8N9W8 422 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 Q8NA96 180 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CCDC191Q8NCU4 936 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 NFKBIDQ8NI38 313 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 APOPT1Q96IL0 206 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZBTB45Q96K62 511 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CD180Q99467 661 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 GPR20Q99678 358 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SDF4Q9BRK5 362 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 MOV10L1Q9BXT6 1211 aaKnown RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TPSD1Q9BZJ3 242 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 GOLGA2P5Q9HBQ8 144 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 DIAPH3Q9NSV4 1193 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 NKIRAS2Q9NYR9 191 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TAS2R10Q9NYW0 307 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 GPR34Q9UPC5 381 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SSX2IPQ9Y2D8 614 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 ENTPD2Q9Y5L3 495 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SNX14Q9Y5W7 946 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 APC2O95996 2303 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SDK1Q7Z5N4 2213 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 NAV3Q8IVL0 2385 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TRGV11A0A075B6L2 103 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 GOLGA6L10A0A0M3HER8 536 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 C2CD4DB7Z1M9 353 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 LEFTY2O00292 366 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC16A3O15427 465 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TSPAN9O75954 239 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 NXPH3O95157 252 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TOP3BO95985 862 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ACADMP11310 421 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZNF37AP17032 561 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 DRD1P21728 446 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 MATN1P21941 496 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 COMTP21964 271 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 NTSR1P30989 418 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 APOBEC3AP31941 199 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 HTR7P34969 479 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 RAD52P43351 418 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 NOVA1P51513 510 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 IRX6P78412 446 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 MC2RQ01718 297 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TLE3Q04726 772 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 GALNT2Q10471 571 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ERV3-1Q14264 604 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 MEA1Q16626 185 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TSTQ16762 297 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC9C2Q5TAH2 1124 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 PIK3AP1Q6ZUJ8 805 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 B4GALNT4Q76KP1 1039 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 R3HCC1LQ7Z5L2 792 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 FUKQ8N0W3 1084 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 B3GALNT2Q8NCR0 500 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC22A17Q8WUG5 538 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ATG4AQ8WYN0 398 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 CUL5Q93034 780 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM125Q96AQ2 219 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 NEU1Q99519 415 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 BARD1Q99728 777 aaKnown RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALG8Q9BVK2 526 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 CINPQ9BW66 212 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALDH8A1Q9H2A2 487 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 PRDM13Q9H4Q3 707 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 SYNCQ9H7C4 482 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 SEMA4GQ9NTN9 838 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TRPM5Q9NZQ8 1165 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D14Q9P2M4 693 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 CHST2Q9Y4C5 530 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 PCDHB7Q9Y5E2 793 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 MCM3APO60318 1980 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 MYH13Q9UKX3 1938 aa5.05□□□□□ -1.6
HMGB1P23-201ENST00000518743 LOC105369274A0A096LPK9 316 aa5.04□□□□□ -1.6
HMGB1P23-201ENST00000518743 LOC102723532A0A0G2JNH3 316 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms