RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PCED1AQ9H1Q7 454 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 TMEM74BQ9NUR3 256 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 EFR3BQ9Y2G0 817 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 PLXND1Q9Y4D7 1925 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3DA0A087WVF3 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3IA0A087WXS9 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3EA0A087X179 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3KA0A087X1G2 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TTC24A2A3L6 582 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3FA6NER0 549 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 LRRC72A6NJI9 287 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 C16orf96A6NNT2 1141 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 C10orf142B7Z368 130 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3LB9A6J9 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PIGNO95427 931 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3HP0C7X1 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PECAM1P16284 738 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 CR2P20023 1033 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TGM1P22735 817 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 MAOBP27338 520 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PTPN7P35236 360 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 HSPA9P38646 679 aaKnown RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 MPLP40238 635 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 NEK3P51956 506 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 MAXP61244 160 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 SPEM2Q0P670 501 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 CCDC15Q0P6D6 951 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PDK1Q15118 436 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 CCDC6Q16204 474 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3GQ6DHY5 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3CQ6IPX1 549 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 BBS12Q6ZW61 710 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 BZW1Q7L1Q6 419 aaKnown RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PARS2Q7L3T8 475 aaKnown RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 CAMK1DQ8IU85 385 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TBC1D3Q8IZP1 549 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 OR2T34Q8NGX1 318 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 DNASE2BQ8WZ79 361 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PIGKQ92643 395 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 BIRC7Q96CA5 298 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 TUBGCP5Q96RT8 1024 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 HINFPQ9BQA5 517 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 MGME1Q9BQP7 344 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 SUV39H2Q9H5I1 410 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 RBM22Q9NW64 420 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
COL1A1-208ENST00000494334 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-208ENST00000494334 NUMA1Q14980 2115 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
COL1A1-208ENST00000494334 MEI4A8MW99 385 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 KCNK1O00180 336 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-208ENST00000494334 FSBPO95073 299 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 IGHV4-34P06331 123 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 ADRB3P13945 408 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 CCNB1P14635 433 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 CETN2P41208 172 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 AP1S1P61966 158 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 AP1B1Q10567 949 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-208ENST00000494334 GRM3Q14832 879 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 WDR45BQ5MNZ6 344 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 SYCP2LQ5T4T6 812 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 MEI1Q5TIA1 1274 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-208ENST00000494334 KIAA0895LQ68EN5 471 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 FBXL19Q6PCT2 694 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 SYT12Q8IV01 421 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 HCAR2Q8TDS4 363 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 P3H4Q92791 437 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 HAUS1Q96CS2 278 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 ZNF641Q96N77 438 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-208ENST00000494334 ALS2CR12Q96Q35 445 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 SMOC1Q9H4F8 434 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 PARD6AQ9NPB6 346 aa13.7□□□□□ -0.22
COL1A1-208ENST00000494334 THADAQ6YHU6 1953 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 APOC4-APOC2K7ER74 178 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 TRAFD1O14545 582 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-208ENST00000494334 LRP3O75074 770 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 JCHAINP01591 159 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 APOC2P02655 101 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ZNF806P0C7X5 589 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 TIMP2P16035 220 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ABL2P42684 1182 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 MAPK8P45983 427 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 PPP2CBP62714 309 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 PPP2CAP67775 309 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 IFI35P80217 286 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms