RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PJA2O43164 708 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 LATO43561 262 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 CER1O95813 267 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 TOP3BO95985 862 aaKnown RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 GSRP00390 522 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 UGT2B4P06133 528 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 RARAP10276 462 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ITIH2P19823 946 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 AMPD1P23109 780 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 PCK1P35558 622 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 GJC1P36383 396 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 CTSKP43235 329 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NEK3P51956 506 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NDST2P52849 883 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 RHOAP61586 193 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 SIM1P81133 766 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 FOXC1Q12948 553 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 PIGHQ14442 188 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 STAT4Q14765 748 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 LRRC73Q5JTD7 316 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 SEL1L3Q68CR1 1132 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NAPEPLDQ6IQ20 393 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 PARS2Q7L3T8 475 aaKnown RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NAXDQ8IW45 347 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGAP12Q8IWW6 846 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NPWQ8N729 165 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF564Q8TBZ8 553 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 VOPP1Q96AW1 172 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 PPP1R16AQ96I34 528 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 KLHL32Q96NJ5 620 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 HDAC8Q9BY41 377 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 KDM4CQ9H3R0 1056 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 LRRC19Q9H756 370 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 LZTFL1Q9NQ48 299 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ETNK2Q9NVF9 386 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 CTTNBP2NLQ9P2B4 639 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 UBA2Q9UBT2 640 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 INTUQ9ULD6 942 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 NENFQ9UMX5 172 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ZFR2Q9UPR6 939 aaKnown RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 REXO2Q9Y3B8 237 aaKnown RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 CXorf51AA0A1B0GTR3 108 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ARHGAP42A6NI28 874 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GOLGA8CPA6NN73 597 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 UPK3BL1B0FP48 263 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 UPK3BL2E5RIL1 263 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 H3BRJ5 948 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 MYO1FO00160 1098 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 TLR4O00206 839 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PRAMEF11O60813 436 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 IGSF6O95976 241 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PAK4O96013 591 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 H2AFZP0C0S5 128 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ADRB3P13945 408 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SPINK2P20155 84 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ITGB7P26010 798 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 HTR7P34969 479 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ARL4AP40617 200 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ARHGAP25P42331 645 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ABL2P42684 1182 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 RGRP47804 291 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 CLDN2P57739 230 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GNG11P61952 73 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ETF1P62495 437 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SLC25A11Q02978 314 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 CCDC15Q0P6D6 951 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SLC14A1Q13336 389 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 DPYSQ14117 519 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 KRT81Q14533 505 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ACAP1Q15027 740 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 TRIP6Q15654 476 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 DPYSL2Q16555 572 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 IFI16Q16666 785 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF284Q2VY69 593 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ATP13A4Q4VNC1 1196 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SETMARQ53H47 684 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 BOLA3Q53S33 107 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 INO80DQ53TQ3 878 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF805Q5CZA5 627 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 H2AFVQ71UI9 128 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 POLNQ7Z5Q5 900 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 TTC7BQ86TV6 843 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 TRIM69Q86WT6 500 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 HORMAD1Q86X24 394 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GATAD2AQ86YP4 633 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PSTKQ8IV42 348 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 RNF10Q8N5U6 811 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 KIF18AQ8NI77 898 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 RHBDD1Q8TEB9 315 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 CTNNBL1Q8WYA6 563 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms