RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CRELD2Q6UXH1 353 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 Q6ZS92 163 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 PAQR9Q6ZVX9 377 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SCD5Q86SK9 330 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CIARTQ8N365 385 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SIMC1Q8NDZ2 872 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CT55Q8WUE5 264 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CACTINQ8WUQ7 758 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 HPDLQ96IR7 371 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 COX4I2Q96KJ9 171 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SMOQ99835 787 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SLX1AQ9BQ83 275 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 DPEP2Q9H4A9 486 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 NCOA5Q9HCD5 579 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 DNAJB12Q9NXW2 375 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 MARCH2Q9P0N8 246 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 TRPS1Q9UHF7 1281 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 AGO2Q9UKV8 859 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 KIAA1024Q9UPX6 916 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 A0A0U1RQS6 177 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 A0A1W2PQJ5 194 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 A8MXQ7 604 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 TISP43B9A030 160 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ZW10O43264 779 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 TACC1O75410 805 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 TMEM63AO94886 807 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 MOCS3O95396 460 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 PIGRP01833 764 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 PLEKP08567 350 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CCNYL3P0C7X3 344 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 HOXC12P31275 282 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CCT6AP40227 531 aaKnown RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CA7P43166 264 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 PPM1FP49593 454 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 NDST1P52848 882 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 NNTQ13423 1086 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ALG11Q2TAA5 492 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ACCSLQ4AC99 568 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 FSCBQ5H9T9 825 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CES4AQ5XG92 561 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 KIAA1161Q6NSJ0 714 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 NYAP1Q6ZVC0 841 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 DYMQ7RTS9 669 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 TAF8Q7Z7C8 310 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 TRIM22Q8IYM9 498 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CARNMT1Q8N4J0 409 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ZADH2Q8N4Q0 377 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ZNF557Q8N988 423 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 ATP11CQ8NB49 1132 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 FIBINQ8TAL6 211 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 FRS2Q8WU20 508 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 PLD4Q96BZ4 506 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 LENG8Q96PV6 779 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 CDK5RAP1Q96SZ6 601 aaKnown RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 MTMR12Q9C0I1 747 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 DYRK4Q9NR20 520 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 DDX19AQ9NUU7 478 aaKnown RBP6.69□□□□□ -1.34
HDAC3-206ENST00000471968 OLAHQ9NV23 265 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 KCNG1Q9UIX4 513 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 STRIP2Q9ULQ0 834 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 KIF3AQ9Y496 699 aa6.69□□□□□ -1.34
HDAC3-206ENST00000471968 IGLON5A6NGN9 336 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 C21orf140B9A014 251 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ANKRD63C9JTQ0 380 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 E9PMD0 336 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 H7C1Q1 480 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 MCF2LO15068 1137 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 CLIC2O15247 247 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 KIAA0754O94854 1291 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 RASGRP1O95267 797 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 CTSLP07711 333 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-206ENST00000471968 SCNN1AP37088 669 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 SLC12A3P55017 1021 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 NCKAP1LP55160 1127 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 OTUD4Q01804 1114 aaKnown RBP6.68□□□□□ -1.34
HDAC3-206ENST00000471968 BIRC2Q13490 618 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 CDH18Q13634 790 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 KRTAP24-1Q3LI83 254 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ARSHQ5FYA8 562 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 BMP2KLQ5H9B9 411 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 CREB3L3Q68CJ9 461 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 HAUS3Q68CZ6 603 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 SPECC1LQ69YQ0 1117 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 TMEM71Q6P5X7 295 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 FAM180AQ6UWF9 173 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 GFRALQ6UXV0 394 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 Q6ZVU0 165 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 C1orf186Q6ZWK4 172 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ERN2Q76MJ5 926 aaKnown RBP6.68□□□□□ -1.34
HDAC3-206ENST00000471968 SYVN1Q86TM6 617 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-206ENST00000471968 APCDD1Q8J025 514 aa6.68□□□□□ -1.34
HDAC3-206ENST00000471968 ARMC2Q8NEN0 867 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms