RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 ATP13A4Q4VNC1 1196 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 PRAMEF14Q5SWL7 426 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 CFAP58Q5T655 872 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 SEL1L3Q68CR1 1132 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 TTC7BQ86TV6 843 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 RHOT2Q8IXI1 618 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 SETD7Q8WTS6 366 aaKnown RBP12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 CAMK1GQ96NX5 476 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 FZD3Q9NPG1 666 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 ITM2BQ9Y287 266 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 FADS3Q9Y5Q0 445 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
PPP1R3F-204ENST00000471261 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 C10orf142B7Z368 130 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 PRAMEF26H0Y7S4 382 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 TLR4O00206 839 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 PIGNO95427 931 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 ADRB1P08588 477 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 KRT7P08729 469 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 XPAP23025 273 aaPredicted RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 SERPINB6P35237 376 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 NUDT1P36639 197 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 CTSKP43235 329 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 TAS2R40P59535 323 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 IL10RBQ08334 325 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 DPYSL3Q14195 570 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 PIP4P1Q86T03 277 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 NAXDQ8IW45 347 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 ATPAF2Q8N5M1 289 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 GDF3Q9NR23 364 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 GGT7Q9UJ14 662 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 ZFR2Q9UPR6 939 aaKnown RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 ASCC3Q8N3C0 2202 aaKnown RBP12.78□□□□□ -0.36
PPP1R3F-204ENST00000471261 SPAARA0A1B0GVQ0 90 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 A0A1W2PR77 199 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 H0Y8X5 98 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 TNNT1P13805 278 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 IL4RP24394 825 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 AKT2P31751 481 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAN1A1P33908 653 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 ABL2P42684 1182 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 RGRP47804 291 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 CCT8P50990 548 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SCNN1BP51168 640 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SGCGQ13326 291 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF235Q14590 738 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 RFTN1Q14699 578 aaPredicted RBP12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 LBRQ14739 615 aaKnown RBP12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SUZ12Q15022 739 aaKnown RBP12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 KIAA1161Q6NSJ0 714 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAP7D3Q8IWC1 876 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 MFSD2AQ8NA29 543 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 NSMCE1Q8WV22 266 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 TSC1Q92574 1164 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 RAB7BQ96AH8 199 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SLC17A9Q9BYT1 436 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 CPEB1Q9BZB8 566 aaKnown RBP12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 CHD5Q8TDI0 1954 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 KNL1Q8NG31 2342 aa12.77□□□□□ -0.37
PPP1R3F-204ENST00000471261 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 TSPAN6O43657 245 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 AP1G1O43747 822 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 DFNA5O60443 496 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 PAK4O96013 591 aaPredicted RBP12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF883P0CG24 379 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 HNRNPA2B1P22626 353 aaKnown RBP12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 MAGEA1P43355 309 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 CLDN2P57739 230 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 NXPH1P58417 271 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 GRM3Q14832 879 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 PDK2Q15119 407 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPA17Q15506 151 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF423Q2M1K9 1284 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 TMEM259Q4ZIN3 620 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 SRLQ86TD4 932 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 CAMK1DQ8IU85 385 aa12.76□□□□□ -0.37
PPP1R3F-204ENST00000471261 CXorf40AQ8TE69 158 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms