RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RIC8BQ9NVN3 520 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 UTP6Q9NYH9 597 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 VTI1BQ9UEU0 232 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 TSPAN16Q9UKR8 245 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 SNX9Q9Y5X1 595 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 MRASO14807 208 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CLASP2O75122 1294 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 BFSP2Q13515 415 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 GRM3Q14832 879 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 SLC36A3Q495N2 470 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 PIGZQ86VD9 579 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 SPPL2CQ8IUH8 684 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 OR2T34Q8NGX1 318 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 OR2T3Q8NH03 318 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 ISL2Q96A47 359 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 RPL10LQ96L21 214 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CSPG4P5Q96PW8 444 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 HERC2P3Q9BVR0 1158 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM39BQ9GZU3 492 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 DGKBQ9Y6T7 804 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 ZNF638Q14966 1978 aaKnown RBP13.9□□□□□ -0.19
NPHP4-207ENST00000470763 EI24O14681 340 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CILPO75339 1184 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CXCL8P10145 99 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 IDUAP35475 653 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 STX5Q13190 355 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CADM3Q8N126 398 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 FSTL5Q8N475 847 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TOP1MTQ969P6 601 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 LRCH3Q96II8 777 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 KCTD15Q96SI1 283 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 APOL2Q9BQE5 337 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 BCO2Q9BYV7 579 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 FANCEQ9HB96 536 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CD300AQ9UGN4 299 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 NDUFB5O43674 189 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MFSD11O43934 449 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 DLX3O60479 287 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MSCO60682 206 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 IL18RAPO95256 599 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 ITGB3P05106 788 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 NCAM1P13591 858 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 LRPAP1P30533 357 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 THOC7Q6I9Y2 204 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PMF1Q6P1K2 205 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 ABRAXAS1Q6UWZ7 409 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 ZNF354CQ86Y25 554 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 DNAAF3Q8N9W5 541 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MFSD2AQ8NA29 543 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PCYOX1LQ8NBM8 494 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 P2RY11Q96G91 374 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 IL22Q9GZX6 179 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 XPR1Q9UBH6 696 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MDM4O15151 490 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SRP72O76094 671 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 NFICP08651 508 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TTKP33981 857 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PRPSAP1Q14558 356 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 NAT9Q9BTE0 207 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 TRIM8Q9BZR9 551 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 NANOGQ9H9S0 305 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PALMDQ9NP74 551 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CROTQ9UKG9 612 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 CPQQ9Y646 472 aa13.89□□□□□ -0.19
NPHP4-207ENST00000470763 PSME4Q14997 1843 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 KCNK1O00180 336 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 CLPXO76031 633 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 OPRL1P41146 370 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms