RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 OR2T34Q8NGX1 318 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 OR2T3Q8NH03 318 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 UHRF1Q96T88 793 aaPredicted RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 DOK1Q99704 481 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 HERC2P3Q9BVR0 1158 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 IL22Q9GZX6 179 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 GPRC5DQ9NZD1 345 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 UBP1Q9NZI7 540 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 VANGL2Q9ULK5 521 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 ZCWPW2A0A1B0GU75 182 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 VDRP11473 427 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 BMP2P12643 396 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 ADSLP30566 484 aaPredicted RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 YBX1P67809 324 aaKnown RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 STX5Q13190 355 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 SHCBP1Q8NEM2 672 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 LRRC40Q9H9A6 602 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 UTP6Q9NYH9 597 aaKnown RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 CD300AQ9UGN4 299 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 CROTQ9UKG9 612 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 INO80B-WBP1J3KQ70 363 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 AQP9O43315 295 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 DDHD2O94830 711 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 ESRRBO95718 433 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 ELK4P28324 431 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PLK1P53350 603 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 RAB15P59190 212 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 C1QTNF8P60827 252 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 GHRHRQ02643 423 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 SLC36A3Q495N2 470 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 JADE1Q6IE81 842 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PIWIL3Q7Z3Z3 882 aaKnown RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 NT5DC4Q86YG4 428 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 SCAIQ8N9R8 606 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 CXorf38Q8TB03 319 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 MAGEE2Q8TD90 523 aaPredicted RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 ADAMTS16Q8TE57 1224 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 ISL2Q96A47 359 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 NXNL1Q96CM4 212 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PPP1R16BQ96T49 567 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 TBCBQ99426 244 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 NAT9Q9BTE0 207 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 CCDC68Q9H2F9 335 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 GIN1Q9NXP7 522 aa14.1□□□□□ -0.15
VPS52-212ENST00000445902 PTBP2Q9UKA9 531 aaKnown RBP14.1□□□□□ -0.15
VPS52-212ENST00000445902 UBDO15205 165 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 SNAP91O60641 907 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 CABYRO75952 493 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 IL18RAPO95256 599 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 YWHAQP27348 245 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 IDUAP35475 653 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 DPYSL2Q16555 572 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 FAM117BQ6P1L5 589 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 ABRAXAS1Q6UWZ7 409 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 KLHL8Q9P2G9 620 aaPredicted RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 SCN4AP35499 1836 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 GABBR2O75899 941 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 SNAP29O95721 258 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 ASNSP08243 561 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 TSPAN8P19075 237 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 OPRL1P41146 370 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 PTPN9P43378 593 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 NR2C2P49116 596 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 TRAP1Q12931 704 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 GRM1Q13255 1194 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 CAPRIN1Q14444 709 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 ZIK1Q3SY52 487 aaPredicted RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 ZNF280DQ6N043 979 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 RAVER1Q8IY67 606 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 CENPLQ8N0S6 344 aaPredicted RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 C17orf50Q8WW18 174 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 TRUB1Q8WWH5 349 aaKnown RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 SGCDQ92629 289 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 SLC45A3Q96JT2 553 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 KLHL25Q9H0H3 589 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 PRDM12Q9H4Q4 367 aa14.09□□□□□ -0.15
VPS52-212ENST00000445902 TRPC5Q9UL62 973 aaPredicted RBP14.09□□□□□ -0.15
VPS52-212ENST00000445902 DHRS12A0PJE2 317 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 TOR1BO14657 336 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 GPC4O75487 556 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 SNRPB2P08579 225 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 SLC35E2BP0CK96 405 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 HSPA1AP0DMV8 641 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 HSPA1BP0DMV9 641 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 RPS3AP61247 264 aaKnown RBP14.08□□□□□ -0.16
VPS52-212ENST00000445902 KCNC4Q03721 635 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 DNASE1L3Q13609 305 aa14.08□□□□□ -0.16
VPS52-212ENST00000445902 SAMD4BQ5PRF9 694 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms