RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TPBGLP0DKB5 382 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 NCF2P19878 526 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TACR2P21452 398 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ETFBP38117 255 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 GLRBP48167 497 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ARCN1P48444 511 aaKnown RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CSRP3P50461 194 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CLCN5P51795 746 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RAP1GDS1P52306 607 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 POU4F1Q01851 419 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RING1Q06587 406 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 SLC10A7Q0GE19 358 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ZNF235Q14590 738 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 KPNB1Q14974 876 aaKnown RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 POLD3Q15054 466 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CNGA3Q16281 694 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 PARP15Q460N3 678 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RABGAP1LQ5R372 815 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RASIP1Q5U651 963 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 SNX30Q5VWJ9 437 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 NEPROQ6NW34 567 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 KIAA0408Q6ZU52 694 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 MAVSQ7Z434 540 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CIR1Q86X95 450 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 SCUBE1Q8IWY4 988 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 LGI2Q8N0V4 545 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 BBS5Q8N3I7 341 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ZNF781Q8N8C0 355 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RBM15BQ8NDT2 890 aaKnown RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CFAP61Q8NHU2 1237 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 STYXQ8WUJ0 223 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 PSMG2Q969U7 264 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TSPAN17Q96FV3 270 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ANKRD27Q96NW4 1050 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ARNT2Q9HBZ2 717 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 OXSMQ9NWU1 459 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 NKX1-2Q9UD57 310 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 RAP2CQ9Y3L5 183 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 ANKRD36A6QL64 1941 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 MEI4A8MW99 385 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 SLCO1B7G3V0H7 640 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 ENTPD5O75356 428 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PIGNO95427 931 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PSMG1O95456 288 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 IGLV3-27P01718 113 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 GNAZP19086 355 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 MPSTP25325 297 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 ARNTP27540 789 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 GABRB3P28472 473 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PRDX6P30041 224 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 OR1E1P30953 314 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 MAP2K2P36507 400 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 GRIA4P48058 902 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 COPAP53621 1224 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PRAMEP78395 509 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 USP4Q13107 963 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PRKAA1Q13131 559 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 SERINC3Q13530 473 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 LAMB3Q13751 1172 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 LBRQ14739 615 aaKnown RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 TAF11Q15544 211 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 LHX8Q68G74 356 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 KLC3Q6P597 504 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 PRSS55Q6UWB4 352 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 NAPRTQ6XQN6 538 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 ACAD11Q709F0 780 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 TMC7Q7Z402 723 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 NET1Q7Z628 596 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 FSTL5Q8N475 847 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 TEX26Q8N6G2 289 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 NXNL1Q96CM4 212 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 TTPALQ9BTX7 342 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 THTPAQ9BU02 230 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 NACA2Q9H009 215 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 DRC3Q9H069 523 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 C1orf21Q9H246 121 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 MRPL46Q9H2W6 279 aaKnown RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 COG4Q9H9E3 785 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 GPBP1L1Q9HC44 474 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-218ENST00000439806 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 XPR1Q9UBH6 696 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 MICAL3Q7RTP6 2002 aa10.53□□□□□ -0.72
CPNE1-218ENST00000439806 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF195O14628 629 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 SLC7A4O43246 635 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ACSL4O60488 711 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms