RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LARGE1O95461 756 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 KLKB1P03952 638 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 TNFRSF8P28908 595 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 TECP42680 631 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 SF3A3Q12874 501 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 STARD3Q14849 445 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 MTHFSDQ2M296 383 aaKnown RBP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 CRY2Q49AN0 593 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 OLFM4Q6UX06 510 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLC16A12Q6ZSM3 486 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM186BQ8IYM0 893 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 HMGB4Q8WW32 186 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 NEUROG1Q92886 237 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 RBM17Q96I25 401 aaKnown RBP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 CNOT7Q9UIV1 285 aaKnown RBP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 DTX4Q9Y2E6 619 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 BCORQ6W2J9 1755 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 TRIP12Q14669 1992 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 NPC1L1Q9UHC9 1359 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 MKI67P46013 3256 aaKnown RBP5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 KIF7Q2M1P5 1343 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLC38A8A6NNN8 435 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 PRC1O43663 620 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 HMOX1P09601 288 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 CPA1P15085 419 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLC16A2P36021 539 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 STAT1P42224 750 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 BTKQ06187 659 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 CXCL9Q07325 125 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 BTBD16Q32M84 506 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 FBXO46Q6PJ61 603 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 Q6ZTK2 550 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 TRILQ7L0X0 811 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 KLBQ86Z14 1044 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLC25A41Q8N5S1 370 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 RBMXL3Q8N7X1 1067 aaKnown RBP5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 STYXQ8WUJ0 223 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 DCPSQ96C86 337 aaKnown RBP5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 URB1-AS1Q96HZ7 61 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 ZNF304Q9HCX3 659 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 PLK2Q9NYY3 685 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 CDC23Q9UJX2 597 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 CNTN6Q9UQ52 1028 aa5.3□□□□□ -1.56
HMGB3P5-201ENST00000428894 PRSS44E7EML9 344 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 CYP1A2P05177 515 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 PPM1AP35813 382 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 GMPSP49915 693 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 RASSF2P50749 326 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 ROR2Q01974 943 aaKnown RBP5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 LTBQ06643 244 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 MEIS3Q99687 375 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 PANK3Q9H999 370 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 PLAC1Q9HBJ0 212 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 ARFGAP3Q9NP61 516 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 KRCC1Q9NPI7 259 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 PNRC2Q9NPJ4 139 aaKnown RBP5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 SELENONQ9NZV5 590 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 MYO6Q9UM54 1294 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 MAGED2Q9UNF1 606 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 USP16Q9Y5T5 823 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 SNED1Q8TER0 1413 aa5.29□□□□□ -1.56
HMGB3P5-201ENST00000428894 A0A0U1RQG5 324 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A18PA6NE21 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A16PA6NEW6 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 GOLGA6L3A6NEY3 463 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 AGAP5A6NIR3 686 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 MBD3L5A6NJ08 208 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A9PA6NNJ1 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 BECN2A8MW95 431 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A5PA8MXJ8 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 ERVV-1B6SEH8 477 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 BBOX1O75936 387 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 TNFRSF6BO95407 300 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A15PP0C7V4 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM90A14PP0C7W9 464 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 RCAN1P53805 252 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FKBP1BP68106 108 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 SPARCL1Q14515 664 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 ASIC2Q16515 512 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLC4A8Q2Y0W8 1093 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 AAGABQ6PD74 315 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 PPP1R42Q7Z4L9 355 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 ANKS1BQ7Z6G8 1248 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 IGFN1Q86VF2 1251 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 TMEM200AQ86VY9 491 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 CCDC25Q86WR0 208 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM217AQ8IXS0 508 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 IL17REQ8NFR9 667 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 GABPB2Q8TAK5 448 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 FAM110DQ8TAY7 271 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 NUDCD2Q8WVJ2 157 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 RSC1A1Q92681 617 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 NAP1L5Q96NT1 182 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 LIN7CQ9NUP9 197 aaKnown RBP5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 KNSTRNQ9Y448 316 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 ATP6V0A2Q9Y487 856 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms