RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PLPP4Q5VZY2 271 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 C10orf107Q8IVU9 208 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 SLC2A13Q96QE2 648 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 ALG9Q9H6U8 611 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 EIF2B3Q9NR50 452 aaKnown RBP14.18□□□□□ -0.14
SCAF4-202ENST00000399804 ARHGAP26Q9UNA1 814 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 SCML2Q9UQR0 700 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 HBS1LQ9Y450 684 aaKnown RBP14.18□□□□□ -0.14
SCAF4-202ENST00000399804 EP400Q96L91 3159 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 ADAMTS4O75173 837 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 LUC7L3O95232 432 aaKnown RBP14.18□□□□□ -0.14
SCAF4-202ENST00000399804 FGF1P05230 155 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 MRPL46Q9H2W6 279 aaKnown RBP14.18□□□□□ -0.14
SCAF4-202ENST00000399804 DPP7Q9UHL4 492 aa14.18□□□□□ -0.14
SCAF4-202ENST00000399804 MTMR11A4FU01 709 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 LYPLA1O75608 230 aaPredicted RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 USP1O94782 785 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 BPGMP07738 259 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 ABCE1P61221 599 aaKnown RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 IFNEQ86WN2 208 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 KCNK4Q9NYG8 393 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 WWOXQ9NZC7 414 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CFAP97Q9P2B7 532 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 XPR1Q9UBH6 696 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 DCXO43602 365 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 EFCAB14O75071 495 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 GLUD1P00367 558 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 FOXN2P32314 431 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CRHR1P34998 444 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 NDST2P52849 883 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 GSCP56915 257 aaPredicted RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 TBCCQ15814 346 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 UBAP2Q5T6F2 1119 aaKnown RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 LRRC8EQ6NSJ5 796 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 LDB1Q86U70 411 aaPredicted RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 SLC22A9Q8IVM8 553 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 KCNN1Q92952 543 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 IL1RL2Q9HB29 575 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 TAGLN3Q9UI15 199 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CLCN5P51795 746 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 C6orf10Q5SRN2 563 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 ALKAL1Q6UXT8 129 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 ARCQ7LC44 396 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 BANPQ8N9N5 519 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 POMKQ9H5K3 350 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 SYCE1LA8MT33 242 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 DNM1LO00429 736 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CTPS1P17812 591 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CCND1P24385 295 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 SLC10A7Q0GE19 358 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 PTPRNQ16849 979 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF697Q5TEC3 545 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 RNF19BQ6ZMZ0 732 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 SETD3Q86TU7 594 aaPredicted RBP14.17□□□□□ -0.14
SCAF4-202ENST00000399804 FAR2Q96K12 515 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 TBATAQ96M53 351 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 YY1AP1Q9H869 796 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 NMUR1Q9HB89 426 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 CLIC5Q9NZA1 410 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 FETUBQ9UGM5 382 aa14.17□□□□□ -0.14
SCAF4-202ENST00000399804 MYO18AQ92614 2054 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 FGBP02675 491 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 LTA4HP09960 611 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 THRAP10827 490 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 ZNF7P17097 686 aaPredicted RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 TFEBP19484 476 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 SERPINA4P29622 427 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 NME5P56597 212 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 GRM3Q14832 879 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 TP53INP2Q8IXH6 220 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MYO1HQ8N1T3 1032 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 OR52K2Q8NGK3 314 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 C2orf15Q8WU43 125 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 DCAKDQ8WVC6 231 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 SIGLEC10Q96LC7 697 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MRPL40Q9NQ50 206 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 VWA7Q9Y334 891 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 PCDHGC4Q9Y5F7 938 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 SLC4A7Q9Y6M7 1214 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 A0A1B0GVM2 712 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 TCAF2A6NFQ2 919 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 FSBPO95073 299 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 SOX11P35716 441 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MPP1Q00013 466 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 ZBTB17Q13105 803 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 DNAJB7Q7Z6W7 309 aaPredicted RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 RBM23Q86U06 439 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 CAND1Q86VP6 1230 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
SCAF4-202ENST00000399804 PKD2L2Q9NZM6 624 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 SOX13Q9UN79 622 aa14.16□□□□□ -0.14
SCAF4-202ENST00000399804 MRPS23Q9Y3D9 190 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms