RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 NIPAL4Q0D2K0 466 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 SLC12A1Q13621 1099 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ATP6AP1Q15904 470 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 HIST2H2ACQ16777 129 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 AASDHQ4L235 1098 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ATAD3CQ5T2N8 411 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 DESI1Q6ICB0 168 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 LINC00523Q86TU6 105 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF677Q86XU0 584 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CLEC10AQ8IUN9 316 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 MAPKAPK5Q8IW41 473 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TDRD5Q8NAT2 981 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 SIMC1Q8NDZ2 872 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 RASSF5Q8WWW0 418 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 RMDN1Q96DB5 314 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 GDF15Q99988 308 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TARS2Q9BW92 718 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF717Q9BY31 904 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 NARFLQ9H6Q4 476 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TLR9Q9NR96 1032 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ADPRHL2Q9NX46 363 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 AREL1O15033 823 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ZBTB5O15062 677 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CHADO15335 359 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 MFN2O95140 757 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 HTR1AP08908 422 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CD68P34810 354 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CAPGP40121 348 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 EIF2DP41214 584 aaKnown RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ILF2Q12905 390 aaKnown RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 SMTNL2Q2TAL5 461 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 KCNT1Q5JUK3 1230 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 SPRED1Q7Z699 444 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ADAMTSL2Q86TH1 951 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 MPP5Q8N3R9 675 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CNTD1Q8N815 330 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 TP53I13Q8NBR0 393 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 TMEM35BQ8NCS4 154 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ACMSDQ8TDX5 336 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 TTC9Q92623 222 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 DPF3Q92784 378 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 FAM20AQ96MK3 541 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 EPS8L2Q9H6S3 715 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ABCB7O75027 752 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 RASAL1O95294 804 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CHRNGP07510 517 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 IL1R2P27930 398 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 GCNT1Q02742 428 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 PPIL2Q13356 520 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 TAF5Q15542 800 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 CYP20A1Q6UW02 462 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 SPARTQ8N0X7 666 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ARFGAP1Q8N6T3 406 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 NAT16Q8N8M0 369 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 LRRC40Q9H9A6 602 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 ACSS2Q9NR19 701 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 UBA2Q9UBT2 640 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 HMGXB4Q9UGU5 601 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 DCDC2Q9UHG0 476 aa9.65□□□□□ -0.86
SF3A3-201ENST00000373019 COPG1Q9Y678 874 aaKnown RBP9.65□□□□□ -0.86
SF3A3-201ENST00000373019 BPTFQ12830 3046 aa9.65□□□□□ -0.87
SF3A3-201ENST00000373019 PCNTO95613 3336 aa9.65□□□□□ -0.87
SF3A3-201ENST00000373019 KCNU1A8MYU2 1149 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 GRID2O43424 1007 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TSPAN1O60635 241 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 DEAF1O75398 565 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SNAP29O95721 258 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 BDNFP23560 247 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 GSTM2P28161 218 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 RRM2P31350 389 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SERPINB9P50453 376 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PPP5CP53041 499 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ADARB1P78563 741 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 FPGSQ05932 587 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF543Q08ER8 600 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TAZQ16635 292 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 FAM205BPQ63HN1 556 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 STEAP3Q658P3 488 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 IL17RDQ8NFM7 739 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 RHOXF1Q8NHV9 184 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 NDNFQ8TB73 568 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HMGCLL1Q8TB92 370 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 FAF2Q96CS3 445 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 C8orf48Q96LL4 319 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 MCEEQ96PE7 176 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TRIM39Q9HCM9 518 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM8AQ9HCN3 771 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 NMRK2Q9NPI5 230 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 CCM2LQ9NUG4 571 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms