RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 HGFP14210 728 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 ITGALP20701 1170 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 NMBRP28336 390 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 GRM5P41594 1212 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 NPY2RP49146 381 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 MPP2Q14168 576 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 SPANXN3Q5MJ09 141 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 TSHZ1Q6ZSZ6 1077 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 TRMT11Q7Z4G4 463 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 UNC93AQ86WB7 457 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 ULK2Q8IYT8 1036 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 DDX28Q9NUL7 540 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
SMARCA1-202ENST00000371122 MYH11P35749 1972 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DOCK2Q92608 1830 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 NCAM2O15394 837 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SERPINI2O75830 405 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 HDCP19113 662 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 GPD2P43304 727 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 MRPS6P82932 125 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TRIM60Q495X7 471 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 RBM23Q86U06 439 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 KBTBD2Q8IY47 623 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 YAF2Q8IY57 180 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ATG16L2Q8NAA4 619 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 OR7D4Q8NG98 312 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SPPL2AQ8TCT8 520 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 UTP15Q8TED0 518 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SLC44A1Q8WWI5 657 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 CENPTQ96BT3 561 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ZNF184Q99676 751 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ZNF670Q9BS34 389 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DGCR6LQ9BY27 220 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SDCBP2Q9H190 292 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TRMT13Q9NUP7 481 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TDRKHQ9Y2W6 561 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 PCDHA11Q9Y5I1 949 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 C2CD4BA6NLJ0 364 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 COX4I1P13073 169 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 NR4A1P22736 598 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 RTP1P59025 263 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SMAD3P84022 425 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 PFKPQ01813 784 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 MADCAM1Q13477 382 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ARL13AQ5H913 290 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ARMC12Q5T9G4 340 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ZNF621Q6ZSS3 439 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SETD3Q86TU7 594 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ADCK1Q86TW2 530 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DHFR2Q86XF0 187 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 EIF1ADQ8N9N8 165 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SEPT8Q92599 483 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 IL22Q9GZX6 179 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ASB8Q9H765 288 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 GSC2O15499 205 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TBC1D4O60343 1298 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 CHRNGP07510 517 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 KLRC2P26717 231 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ASPAP45381 313 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 IL5RAQ01344 420 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SREBF2Q12772 1141 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SLC25A52Q3SY17 297 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 TIGD2Q4W5G0 525 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 GPR158Q5T848 1215 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 RNF220Q5VTB9 566 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 FAM151BQ6UXP7 276 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 RINLQ6ZS11 566 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 CLVS1Q8IUQ0 354 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DQX1Q8TE96 717 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 FAM120BQ96EK7 910 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 KCTD14Q9BQ13 255 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 NTPCRQ9BSD7 190 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 DPY30Q9C005 99 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 FBXO44Q9H4M3 255 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SYTL2Q9HCH5 934 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 KCNK4Q9NYG8 393 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 GMIPQ9P107 970 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 SLC25A13Q9UJS0 675 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 PLLPQ9Y342 182 aa9.19□□□□□ -0.94
SMARCA1-202ENST00000371122 CLOCKO15516 846 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 PCDH8O95206 1070 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 ASGR1P07306 291 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 BPGMP07738 259 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 CNTFP26441 200 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 ATP5C1P36542 298 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 PPP1R8Q12972 351 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 PCID2Q5JVF3 399 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 KYAT3Q6YP21 454 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 ZNF781Q8N8C0 355 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 NKD2Q969F2 451 aaPredicted RBP9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 TLCD1Q96CP7 247 aa9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 RPL10LQ96L21 214 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-202ENST00000371122 IGFLR1Q9H665 355 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms