RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 FASNP49327 2511 aaKnown RBP17.31■□□□□ 0.36
BRCC3-202ENST00000340647 LRP4O75096 1905 aa17.31■□□□□ 0.36
BRCC3-202ENST00000340647 ITPR1Q14643 2758 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 A0A1W2PQJ5 194 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 GOLGA8CPA6NN73 597 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 KRIT1O00522 736 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 PAK4O96013 591 aaPredicted RBP17.3■□□□□ 0.36
BRCC3-202ENST00000340647 UGT2B4P06133 528 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 THEGLP0DJG4 465 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 HNRNPA2B1P22626 353 aaKnown RBP17.3■□□□□ 0.36
BRCC3-202ENST00000340647 RGRP47804 291 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 OVGP1Q12889 678 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 INO80DQ53TQ3 878 aaPredicted RBP17.3■□□□□ 0.36
BRCC3-202ENST00000340647 LRRC73Q5JTD7 316 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 ERMARDQ5T6L9 678 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 TXNRD3NBQ6F5E7 133 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 ARHGAP36Q6ZRI8 547 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 EID2Q8N6I1 236 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 KLHDC7BQ96G42 594 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 CELF6Q96J87 481 aaKnown RBP17.3■□□□□ 0.36
BRCC3-202ENST00000340647 KLHL32Q96NJ5 620 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 C1QTNF2Q9BXJ5 285 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 SLC17A9Q9BYT1 436 aa17.3■□□□□ 0.36
BRCC3-202ENST00000340647 DHX35Q9H5Z1 703 aaKnown RBP17.3■□□□□ 0.36
BRCC3-202ENST00000340647 ASXL3Q9C0F0 2248 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 A0A087X0T9 212 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 ANKRD62A6NC57 917 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 IGLON5A6NGN9 336 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 SDC3O75056 442 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 POP4O95707 220 aaKnown RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 GYPCP04921 128 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 ITGAVP06756 1048 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 FAM228BP0C875 321 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 TIMP2P16035 220 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 CLDN6P56747 220 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 UBASH3AP57075 661 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 GEMIN4P57678 1058 aaKnown RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 TPI1P60174 286 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 SNRPD1P62314 119 aaKnown RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 CAMK2BQ13554 666 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 PARP15Q460N3 678 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 PPP1R2P3Q6NXS1 205 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 ZNF653Q96CK0 615 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 PPP1R16AQ96I34 528 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 LRIG1Q96JA1 1093 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 EXOC2Q96KP1 924 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 DYRK4Q9NR20 520 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 UCKL1Q9NWZ5 548 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 CWC15Q9P013 229 aaKnown RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 KLF15Q9UIH9 416 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 PNMA8BQ9ULN7 279 aaPredicted RBP17.29■□□□□ 0.36
BRCC3-202ENST00000340647 HPCAL4Q9UM19 191 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 HS3ST3A1Q9Y663 406 aa17.29■□□□□ 0.36
BRCC3-202ENST00000340647 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 TRIM38O00635 465 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 FGF10O15520 208 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 ERCC2P18074 760 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 HTR7P34969 479 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 RPS21P63220 83 aaKnown RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 DPYSQ14117 519 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 SLC45A4Q5BKX6 768 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 KIAA1161Q6NSJ0 714 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 FBXL19Q6PCT2 694 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 GDPD4Q6W3E5 623 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 RFX8Q6ZV50 586 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 ZSWIM9Q86XI8 627 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 CPNE8Q86YQ8 564 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 RYBPQ8N488 228 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-202ENST00000340647 ARHGEF26Q96DR7 871 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 ETNK2Q9NVF9 386 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 KLHL11Q9NVR0 708 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 IFNKQ9P0W0 207 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 MYO1AQ9UBC5 1043 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
BRCC3-202ENST00000340647 APC2O95996 2303 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 SMG1Q96Q15 3661 aaKnown RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 FAM149AA5PLN7 773 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 EEF2KO00418 725 aaKnown RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 ENC1O14682 589 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 MUSKO15146 869 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 PIGNO95427 931 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 ARRB1P49407 418 aaPredicted RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 ACADVLP49748 655 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 NDST2P52849 883 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 CCDC15Q0P6D6 951 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
BRCC3-202ENST00000340647 FZD2Q14332 565 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
BRCC3-202ENST00000340647 DHRS13Q6UX07 377 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms