RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CSPG4P5Q96PW8 444 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 CHP1Q99653 195 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 NHEJ1Q9H9Q4 299 aaPredicted RBP28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 SP110Q9HB58 689 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 LHX3Q9UBR4 397 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 SLC31A1O15431 190 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 FLRT2O43155 660 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 TMEM253P0C7T8 217 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 RPS21P63220 83 aaKnown RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 SIM1P81133 766 aaPredicted RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 TBX2Q13207 712 aaPredicted RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 KRT81Q14533 505 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 GRM3Q14832 879 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 TMCO3Q6UWJ1 677 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 DBX2Q6ZNG2 339 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 ZSCAN30Q86W11 494 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 KLK6Q92876 244 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 VOPP1Q96AW1 172 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 ELF4Q99607 663 aaPredicted RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 CPEB1Q9BZB8 566 aaKnown RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 PCDH18Q9HCL0 1135 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 ZFR2Q9UPR6 939 aaKnown RBP28■■■□□ 2.07
ATPAF1-201ENST00000329231 PCNX2A6NKB5 2137 aa28■■■□□ 2.07
ATPAF1-201ENST00000329231 SPAARA0A1B0GVQ0 90 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 TSPAN6O43657 245 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 PCDHGA12O60330 932 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 PALMO75781 387 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 PROSCO94903 275 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 PRLRP16471 622 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 AMPD1P23109 780 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 AKT2P31751 481 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 NXPH1P58417 271 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 IL10RBQ08334 325 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 RFTN1Q14699 578 aaPredicted RBP27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 TMEM259Q4ZIN3 620 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 TMEM145Q8NBT3 493 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 EXOC2Q96KP1 924 aa27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 RCOR3Q9P2K3 495 aaPredicted RBP27.99■■■□□ 2.07
ATPAF1-201ENST00000329231 A0A1B0GTQ1 180 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 NEMP1O14524 444 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 HNRNPA2B1P22626 353 aaKnown RBP27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 CDH6P55285 790 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 TRIP6Q15654 476 aaKnown RBP27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 SEL1L3Q68CR1 1132 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 TTC7BQ86TV6 843 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 ERVMER34-1Q9H9K5 563 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 DKK3Q9UBP4 350 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 IPO11Q9UI26 975 aaKnown RBP27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 ANGPTL2Q9UKU9 493 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 PCOLCE2Q9UKZ9 415 aa27.98■■■□□ 2.07
ATPAF1-201ENST00000329231 YKT6O15498 198 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 SERPINB6P35237 376 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 ABL2P42684 1182 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 OXR1Q8N573 874 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 TSC1Q92574 1164 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 KLHDC7BQ96G42 594 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 CINPQ9BW66 212 aaPredicted RBP27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 SLC17A9Q9BYT1 436 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 SPTLC3Q9NUV7 552 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 ETNK2Q9NVF9 386 aa27.97■■■□□ 2.07
ATPAF1-201ENST00000329231 INSIG1O15503 277 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 CBFA2T3O75081 653 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 CSNK1DP48730 415 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 ARRB1P49407 418 aaPredicted RBP27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 ZNF75DP51815 510 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 FAM193AP78312 1265 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 SHC2P98077 582 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 PRAMEF14Q5SWL7 426 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 ARHGAP36Q6ZRI8 547 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 FAM71BQ8TC56 605 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 HCAR2Q8TDS4 363 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 RHBDD1Q8TEB9 315 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 MRFAP1L1Q96HT8 127 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 ZNF599Q96NL3 588 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 MYOCQ99972 504 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 CA5BQ9Y2D0 317 aa27.96■■■□□ 2.07
ATPAF1-201ENST00000329231 MAN1A1P33908 653 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 GRK6P43250 576 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 IL9RQ01113 521 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 SGCGQ13326 291 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 INAVAQ3KP66 663 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 TP53INP2Q8IXH6 220 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 SLC35G2Q8TBE7 412 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 FAM174AQ8TBP5 190 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 ZNF641Q96N77 438 aaPredicted RBP27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 TUBGCP5Q96RT8 1024 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 CDC6Q99741 560 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 FZD3Q9NPG1 666 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 CABIN1Q9Y6J0 2220 aa27.95■■■□□ 2.06
ATPAF1-201ENST00000329231 TMEM131Q92545 1883 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 AREL1O15033 823 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 KRT7P08729 469 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 XPAP23025 273 aaPredicted RBP27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 GJC1P36383 396 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 RENBPP51606 427 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 SUOXP51687 545 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 NSUN2Q08J23 767 aaKnown RBP eCLIP27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 FOXC1Q12948 553 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 TMCO4Q5TGY1 634 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 SPATS2Q86XZ4 545 aaKnown RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms