RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EHD3Q9NZN3 535 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 XPR1Q9UBH6 696 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CD3EAPO15446 510 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ZNF37AP17032 561 aaPredicted RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GOT1P17174 413 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GABRB2P47870 512 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 TRIM48Q8IWZ4 208 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 LGI2Q8N0V4 545 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 C4orf32Q8N8J7 132 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 SNX15Q9NRS6 342 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 BIRC5O15392 142 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 KCNH1O95259 989 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ZBTB11O95625 1053 aaPredicted RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ATP12AP54707 1039 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 CTBP1Q13363 440 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 SYT12Q8IV01 421 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 PARP8Q8N3A8 854 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 FAM47BQ8NA70 645 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 SERAC1Q96JX3 654 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GINS4Q9BRT9 223 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 MOV10Q9HCE1 1003 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ZSCAN32Q9NX65 697 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 EGFL7Q9UHF1 273 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GNEQ9Y223 722 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 CYP7B1O75881 506 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 HGFP14210 728 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 MAGEA10P43363 369 aaPredicted RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ZACNQ401N2 412 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 RETSATQ6NUM9 610 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 TMEM159Q96B96 161 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 CATSPERZQ9NTU4 200 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 CLTBP09497 229 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GRK3P35626 688 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 TGFB2P61812 414 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 TRMT11Q7Z4G4 463 aaKnown RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 KRT73Q86Y46 540 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 HSD17B14Q9BPX1 270 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 RECQL4O94761 1208 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 RECQL5O94762 991 aaPredicted RBP16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 MYL12AP19105 171 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 GPR15P49685 360 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 TMEM132BQ14DG7 1078 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 ARHGAP15Q53QZ3 475 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 FAM83AQ86UY5 434 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 OOSP2Q86WS3 158 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 PHACTR4Q8IZ21 702 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 MCOLN3Q8TDD5 553 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 IDI2Q9BXS1 227 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 EPB41L1Q9H4G0 881 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 KLHL28Q9NXS3 571 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
SH3RF1-201ENST00000284637 KIAA1210Q9ULL0 1709 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 S100A9P06702 114 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 RHBDL3P58872 404 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ACSM2AQ08AH3 577 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 PHKG1Q16816 387 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ACSM2BQ68CK6 577 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 GCNT7Q6ZNI0 430 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 PIWIL4Q7Z3Z4 852 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 RNF180Q86T96 592 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 OLFM1Q99784 485 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ARL15Q9NXU5 204 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 TSPAN19P0C672 248 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 CD86P42081 329 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 CSNK2BP67870 215 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 TNK2Q07912 1038 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 WDR55Q9H6Y2 383 aaPredicted RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 CAB39LQ9H9S4 337 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 RAD18Q9NS91 495 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 PCDHB5Q9Y5E4 795 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 JCADQ9P266 1359 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 DIP2BQ9P265 1576 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 CCNKO75909 580 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 PABPC1P11940 636 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 DPYSQ14117 519 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 INO80DQ53TQ3 878 aaPredicted RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 AGRPO00253 132 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ALDH1A2O94788 518 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 DBTP11182 482 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 POLR2EP19388 210 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 NOS3P29474 1203 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 KPNA1P52294 538 aaPredicted RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 FUT2Q10981 343 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ZSWIM7Q19AV6 140 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 NEK10Q6ZWH5 1172 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 TCF12Q99081 682 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 NPAS2Q99743 824 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 HES2Q9Y543 173 aa16.6■□□□□ 0.25
SH3RF1-201ENST00000284637 FFAR3O14843 346 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 GPR42O15529 346 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 FAM155BO75949 473 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms