RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ELMO2Q96JJ3 720 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 LRGUKQ96M69 825 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 MRPL57Q9BQC6 102 aaKnown RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 RTP3Q9BQQ7 232 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 PAAF1Q9BRP4 392 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 SLC39A8Q9C0K1 460 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 NCKIPSDQ9NZQ3 722 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 STX16-NPEPL1H3BU86 382 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 DNAJA2O60884 412 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 IGLV3-25P01717 112 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 CPT1AP50416 773 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 GEMP55040 296 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 MARVELD2Q8N4S9 558 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 CEP70Q8NHQ1 597 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 HEXDCQ8WVB3 486 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 MRM3Q9HC36 420 aaKnown RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 ENTPD7Q9NQZ7 604 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 TREX1Q9NSU2 369 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 FLRT1Q9NZU1 646 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 RIMS3Q9UJD0 308 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 COL4A4P53420 1690 aaPredicted RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 C15orf38-AP3S2A0A0A6YYH1 394 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 CASTOR2A6NHX0 329 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 TRPC5OSA6NMA1 111 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 SDHDO14521 159 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 PMPCBO75439 489 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 BCAS2O75934 225 aaPredicted RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 SNUPNO95149 360 aaKnown RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 CD151P48509 253 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 DNAJB13P59910 316 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 SH2D4BQ5SQS7 431 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 RARS2Q5T160 578 aaKnown RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 ZNF470Q6ECI4 717 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 FAM171BQ6P995 826 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 PIWIL4Q7Z3Z4 852 aaKnown RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 ARPINQ7Z6K5 226 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 LILRA2Q8N149 483 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 SCML4Q8N228 414 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 LZTR1Q8N653 840 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 BHLHE22Q8NFJ8 381 aaPredicted RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 HAPLN3Q96S86 360 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 SUDS3Q9H7L9 328 aaPredicted RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 COPS7BQ9H9Q2 264 aaPredicted RBP15.4■□□□□ 0.06
DDX56-201ENST00000258772 ST3GAL5Q9UNP4 418 aa15.4■□□□□ 0.06
DDX56-201ENST00000258772 A0A087X1B8 175 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 ARL5CA6NH57 179 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 HLA-DQB2P05538 268 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 PAMP19021 973 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 ATP5F1P24539 256 aaPredicted RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 HOXC8P31273 242 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 POU4F1Q01851 419 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 RBBP5Q15291 538 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 RANBP10Q6VN20 620 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 TICAM1Q8IUC6 712 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 NPAS2Q99743 824 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 TRPV6Q9H1D0 765 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 POMKQ9H5K3 350 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 DMAP1Q9NPF5 467 aaPredicted RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 NDFIP2Q9NV92 336 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 RBM22Q9NW64 420 aaKnown RBP eCLIP15.39■□□□□ 0.05
DDX56-201ENST00000258772 CLIC5Q9NZA1 410 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 FBXO5Q9UKT4 447 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 NEMP2A6NFY4 417 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 IRAK2O43187 625 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 PAGE1O75459 146 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 HSPA1AP0DMV8 641 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 HSPA1BP0DMV9 641 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 HNRNPLP14866 589 aaKnown RBP eCLIP15.39■□□□□ 0.05
DDX56-201ENST00000258772 HOXC13P31276 330 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 RPL9P32969 192 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 SCNN1GP51170 649 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 IRF5Q13568 498 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 UPP1Q16831 310 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 KIAA0930Q6ICG6 404 aaPredicted RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 CNSTQ6PJW8 725 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 KDELC2Q7Z4H8 507 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 ADCY4Q8NFM4 1077 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 SCAMP5Q8TAC9 235 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 DLG3Q92796 817 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 TMA16Q96EY4 203 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 MRGPRX2Q96LB1 330 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 PARK7Q99497 189 aaKnown RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 ACBD6Q9BR61 282 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 KATNAL1Q9BW62 490 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 FSD1LQ9BXM9 530 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 ATXN3LQ9H3M9 355 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 CATSPERBQ9H7T0 1116 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 CHST12Q9NRB3 414 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 TMLHEQ9NVH6 421 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 UBAP1Q9NZ09 502 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.39■□□□□ 0.05
DDX56-201ENST00000258772 RAB26Q9ULW5 256 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 SLC4A7Q9Y6M7 1214 aa15.39■□□□□ 0.05
DDX56-201ENST00000258772 ACOT8O14734 319 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 AURKAO14965 403 aa15.38■□□□□ 0.05
DDX56-201ENST00000258772 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
DDX56-201ENST00000258772 PMLP29590 882 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms