RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ARHGAP42A6NI28 874 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 SOAT2O75908 522 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ZSCAN5DPP0CG00 497 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ATF6P18850 670 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ETFBP38117 255 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 VIPR2P41587 438 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 MMP13P45452 471 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 GDF10P55107 478 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 PITX1P78337 314 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ILF2Q12905 390 aaKnown RBP17.53■□□□□ 0.4
PHGDH-234ENST00000642041 PDIA2Q13087 525 aaKnown RBP17.53■□□□□ 0.4
PHGDH-234ENST00000642041 PLK5Q496M5 336 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 UMODL1-AS1Q8N2C9 162 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 PYROXD2Q8N2H3 581 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ADAM32Q8TC27 787 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 P2RY11Q96G91 374 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 ZSWIM3Q96MP5 696 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 CORO1BQ9BR76 489 aa17.53■□□□□ 0.4
PHGDH-234ENST00000642041 IGLV3-10A0A075B6K4 115 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 DRGXA6NNA5 263 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 E9PAM4 449 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 H3BQF6 201 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 HYAL3O43820 417 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-234ENST00000642041 ANXA9O76027 345 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 STX2P32856 288 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 IFNAR2P48551 515 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 PXNP49023 591 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-234ENST00000642041 SKOR1P84550 965 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 TWF1Q12792 350 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 SLC10A2Q12908 348 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-234ENST00000642041 CCINQ13939 588 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 KYNUQ16719 465 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 C5orf22Q49AR2 442 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 TEX44Q53QW1 395 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 RABGAP1LQ5R372 815 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 SDHAF4Q5VUM1 108 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 RWDD4Q6NW29 188 aaKnown RBP17.52■□□□□ 0.4
PHGDH-234ENST00000642041 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 PID1Q7Z2X4 250 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 PROSER1Q86XN7 944 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 PSMG2Q969U7 264 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 TMEM248Q9NWD8 314 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 SFMBT1Q9UHJ3 866 aa17.52■□□□□ 0.4
PHGDH-234ENST00000642041 ASCC3Q8N3C0 2202 aaKnown RBP17.52■□□□□ 0.39
PHGDH-234ENST00000642041 LNP1A1A4G5 178 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 ZNF840PA6NDX5 716 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 SPECC1L-ADORA2AF8WAN1 911 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 POLR3GO15318 223 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-234ENST00000642041 MFSD11O43934 449 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 NEBLO76041 1014 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 ETS1P14921 441 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 CCR2P41597 374 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 SOX9P48436 509 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 RENBPP51606 427 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 EFEMP1Q12805 493 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 CACNA1EQ15878 2313 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 PARP15Q460N3 678 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 KIAA1211LQ6NV74 962 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 LRRC8BQ6P9F7 803 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 TXNDC11Q6PKC3 985 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 C19orf48Q6RUI8 117 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 RALGPS2Q86X27 583 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-234ENST00000642041 ZBED8Q8IZ13 594 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 BBS5Q8N3I7 341 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 ATPAF2Q8N5M1 289 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 GIPC2Q8TF65 315 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 CYTH2Q99418 400 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 SIK2Q9H0K1 926 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 ETNK1Q9HBU6 452 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 TMEM9BQ9NQ34 198 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 LGALS13Q9UHV8 139 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 IKBKGQ9Y6K9 419 aa17.51■□□□□ 0.39
PHGDH-234ENST00000642041 MYO16Q9Y6X6 1858 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 EML5Q05BV3 1969 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 SLC12A8A0AV02 714 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 F5H5T6 163 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 RNF103O00237 685 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 MATN3O15232 486 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 CAPNS1P04632 268 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 APRTP07741 180 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 NR1D1P20393 614 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 CTHP32929 405 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 CHKAP35790 457 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 IFI35P80217 286 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 HNRNPDQ14103 355 aaKnown RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 NAPEPLDQ6IQ20 393 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 CCDC117Q8IWD4 279 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 YAF2Q8IY57 180 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 GLIS1Q8NBF1 620 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 GABPB2Q8TAK5 448 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 GCNAQ96QF7 691 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 DUSP15Q9H1R2 295 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 KLHL8Q9P2G9 620 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-234ENST00000642041 KLK13Q9UKR3 277 aa17.5■□□□□ 0.39
PHGDH-234ENST00000642041 HS3ST4Q9Y661 456 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms