RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 AASDHQ4L235 1098 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 SFRP4Q6FHJ7 346 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 CEP85Q6P2H3 762 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 TMED8Q6PL24 325 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 PARM1Q6UWI2 310 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 GET4Q7L5D6 327 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 KCTD20Q7Z5Y7 419 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 ITPRIPQ8IWB1 547 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 ADGRF4Q8IZF3 695 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 CLASRPQ8N2M8 674 aaKnown RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 FAM109AQ8N4B1 249 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 PIBF1Q8WXW3 757 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 ANP32BQ92688 251 aaKnown RBP5.87□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF558Q96NG5 402 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 TRIM5Q9C035 493 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 NAPBQ9H115 298 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 PDCL3Q9H2J4 239 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 CXorf36Q9H7Y0 433 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 GALNT9Q9HCQ5 603 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 CEP72Q9P209 647 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 IGSF9Q9P2J2 1179 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 TUBE1Q9UJT0 475 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 ST3GAL5Q9UNP4 418 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 KALRNO60229 2985 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 NRCAMQ92823 1304 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 KANSL1LA0AUZ9 987 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 hCG_1984214I3L0E3 225 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SYT5O00445 386 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 MUSKO15146 869 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 RNF113AO15541 343 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 TLR5O60602 858 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ATP9AO75110 1047 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 TOP1P11387 765 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 LAG3P18627 525 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 TCF7P36402 384 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 VAV2P52735 878 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 STARD6P59095 220 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 HAND2P61296 217 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 NTHL1P78549 312 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SHC2P98077 582 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 PLP2Q04941 152 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 PTK2BQ14289 1009 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SPARCL1Q14515 664 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 PLCB4Q15147 1175 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 MAPKAPK3Q16644 382 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SPDYE7PQ495Y7 208 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 CD300EQ496F6 205 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 VPS53Q5VIR6 699 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ARL6IP4Q66PJ3 421 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 CRTC1Q6UUV9 634 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SLC39A11Q8N1S5 342 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 MYCT1Q8N699 235 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 IL17DQ8TAD2 202 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 CCT6BQ92526 530 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SNX19Q92543 992 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 GLG1Q92896 1179 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 FGF14Q92915 247 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 KXD1Q9BQD3 176 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SCNM1Q9BWG6 230 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ALOXE3Q9BYJ1 711 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ARRDC1-AS1Q9H2J1 176 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 OBP2BQ9NPH6 170 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 SMPD4Q9NXE4 827 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 LUZP4Q9P127 313 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 FBXO4Q9UKT5 387 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 NDRG4Q9ULP0 352 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 NDRG2Q9UN36 371 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 LZTS1Q9Y250 596 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 MRPS17Q9Y2R5 130 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 TRPV2Q9Y5S1 764 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 NOX1Q9Y5S8 564 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 HECTD1Q9ULT8 2610 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 GOLGA4Q13439 2230 aaKnown RBP5.86□□□□□ -1.47
SF3B3-214ENST00000572365 ADAMTS9Q9P2N4 1935 aa5.86□□□□□ -1.47
SF3B3-214ENST00000572365 CCDC171Q6TFL3 1326 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 A0A0B4J269 797 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 GSTTP1A0A1W2PQM5 241 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 LGALS16A8MUM7 142 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 F5H697 171 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TRIAP1O43715 76 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 FAM20BO75063 409 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZC3H11AO75152 810 aaKnown RBP eCLIP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CSDE1O75534 798 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 RPS6KA5O75582 802 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PIAS2O75928 621 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 RETP07949 1114 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 SLC3A2P08195 630 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CNPP09543 421 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 LAMP2P13473 410 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZFP36P26651 326 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CD6P30203 668 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 SERPINF1P36955 418 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 FOXO1Q12778 655 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms