RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 NR2C2P49116 596 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 PPIDQ08752 370 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 PDK1Q15118 436 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 MARC1Q5VT66 337 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 DCAF12L1Q5VU92 463 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 BBS12Q6ZW61 710 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 C11orf74Q86VG3 221 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 PGBD5Q8N414 524 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 DEFB119Q8N690 84 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 GRIN3AQ8TCU5 1115 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 GANCQ8TET4 914 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 MAML1Q92585 1016 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 FATE1Q969F0 183 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 FAM131CQ96AQ9 280 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 HDAC11Q96DB2 347 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 NSMCE3Q96MG7 304 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 ZDHHC6Q9H6R6 413 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 SEPT3Q9UH03 358 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 EVLQ9UI08 416 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 SMG5Q9UPR3 1016 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 NCKAP1Q9Y2A7 1128 aa12.12□□□□□ -0.47
RABGGTA-218ENST00000560777 PLXND1Q9Y4D7 1925 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 KPNA3O00505 521 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 NDUFS2O75306 463 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 GJB3O75712 270 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 CCNB1P14635 433 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 MMP13P45452 471 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 RENBPP51606 427 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 CNTN1Q12860 1018 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 SPDYCQ5MJ68 293 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 TIGD7Q6NT04 549 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 GDPD4Q6W3E5 623 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 B4GALNT4Q76KP1 1039 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 LPCAT2Q7L5N7 544 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 SRLQ86TD4 932 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 NSMCE1Q8WV22 266 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 P3H4Q92791 437 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 GPR174Q9BXC1 333 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 BTBD1Q9H0C5 482 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 RAB23Q9ULC3 237 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
RABGGTA-218ENST00000560777 APOC4-APOC2K7ER74 178 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 APOC2P02655 101 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 UGT2B4P06133 528 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 CR2P20023 1033 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ITGB7P26010 798 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 CETN2P41208 172 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 PTGER3P43115 390 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 SCNN1BP51168 640 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 TAS2R38P59533 333 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 RAD51Q06609 339 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF33AQ06730 810 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 AP1B1Q10567 949 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF235Q14590 738 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ELF2Q15723 593 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 FAM182AQ5T1J6 154 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 PIP5KL1Q5T9C9 394 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 AGBL4Q5VU57 503 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 LAIR1Q6GTX8 287 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 SLC41A1Q8IVJ1 513 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 CADM4Q8NFZ8 388 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 LOXL4Q96JB6 756 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 MGME1Q9BQP7 344 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 HDAC8Q9BY41 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms