RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SHC3Q92529 594 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CFAP36Q96G28 342 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 HPS4Q9NQG7 708 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 AGPAT3Q9NRZ7 376 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 TBC1D22BQ9NU19 505 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 C20orf96Q9NUD7 363 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 USTQ9Y2C2 406 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 GOLGA8JA6NMD2 632 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 RAD51BO15315 384 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 EIF3DO15371 548 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 USP12O75317 370 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 DLGAP3O95886 979 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 AMHP03971 560 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 TCF4P15884 667 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 PROZP22891 400 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 RBL1P28749 1068 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 TRIM25Q14258 630 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 BRMS1LQ5PSV4 323 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 INTS11Q5TA45 600 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 TMEM35BQ8NCS4 154 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 CYGBQ8WWM9 190 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 APBB2Q92870 758 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 COA7Q96BR5 231 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 PLAC1Q9HBJ0 212 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 A0A1W2PQ72 361 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 B4GAT1O43505 415 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 AVILO75366 819 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 UNGP13051 313 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 TCF3P15923 654 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 GRIK1P39086 918 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 EIF2DP41214 584 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 SLC9A3P48764 834 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 NR2C2P49116 596 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 HK2P52789 917 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 ABCE1P61221 599 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 NAB1Q13506 487 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 CTF1Q16619 201 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 ANO4Q32M45 955 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 CATSPEREQ5SY80 951 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 C1orf220Q5T0J3 134 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 AFAP1L2Q8N4X5 818 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 BTBD2Q9BX70 525 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 PFDN2Q9UHV9 154 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
SPIDR-217ENST00000522117 RAD54BQ9Y620 910 aa12.18□□□□□ -0.46
SPIDR-217ENST00000522117 ISPDA4D126 451 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 TNFAIP2Q03169 654 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 TARDBPQ13148 414 aaKnown RBP eCLIP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 DSC3Q14574 896 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 HIST2H2ACQ16777 129 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 PPP1R3AQ16821 1122 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 AGAP6Q5VW22 663 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 RINT1Q6NUQ1 792 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 CAMK1DQ8IU85 385 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ADGRG5Q8IZF4 528 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 AADATQ8N5Z0 425 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 IL17RDQ8NFM7 739 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ADAM32Q8TC27 787 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 SEPT8Q92599 483 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 AGAP4Q96P64 663 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ALOXE3Q9BYJ1 711 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 PDZD7Q9H5P4 517 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 CD320Q9NPF0 282 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 HOMER2Q9NSB8 354 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 DDX28Q9NUL7 540 aaKnown RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ATP6V1G2-DDX39BF2Z307 99 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ABCB7O75027 752 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 UPK1BO75841 260 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 NDST3O95803 873 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 CSH1P0DML2 217 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 CSH2P0DML3 217 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 ALAS2P22557 587 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 HTR1BP28222 390 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 SLC26A3P40879 764 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 HTR2BP41595 481 aa12.17□□□□□ -0.46
SPIDR-217ENST00000522117 GCLMP48507 274 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms