RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 C1orf210Q8IVY1 113 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 ADGRG5Q8IZF4 528 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 PTGR2Q8N8N7 351 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 TP53I13Q8NBR0 393 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 PPP1R10Q96QC0 940 aaKnown RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 YME1L1Q96TA2 773 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 GPR87Q9BY21 358 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 SIL1Q9H173 461 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 ACAD9Q9H845 621 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 GALNT9Q9HCQ5 603 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 FSCN3Q9NQT6 498 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 INTS13Q9NVM9 706 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 AURKAIP1Q9NWT8 199 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CWC25Q9NXE8 425 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 KCND3Q9UK17 655 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZFR2Q9UPR6 939 aaKnown RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 FBN2P35556 2912 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 COL12A1Q99715 3063 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 A0A1W2PPH5 198 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 C3orf70A6NLC5 250 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 C19orf81C9J6K1 198 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 CTIFO43310 598 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 ORC4O43929 436 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 NUAK1O60285 661 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 USO1O60763 962 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 DUSP11O75319 330 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 ONECUT2O95948 504 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 CFIP05156 583 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 DCNP07585 359 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 PNPLA4P41247 253 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 STAT1P42224 750 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 RAP1GAPP47736 663 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 CCR9P51686 369 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 DRG2P55039 364 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 PSMC6P62333 389 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 RPP30P78346 268 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 ITIH3Q06033 890 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 FOXL1Q12952 345 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SEMA3BQ13214 749 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 KRT32Q14532 448 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SEC23BQ15437 767 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM196Q5HYL7 178 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM63BQ5T3F8 832 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 CCDC144NLQ6NUI1 221 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 MSANTD2Q6P1R3 559 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 INO80CQ6PI98 192 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMTC3Q6ZXV5 915 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 RBM23Q86U06 439 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 DTX2Q86UW9 622 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SYT12Q8IV01 421 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM171Q8WVE6 324 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 RSRC1Q96IZ7 334 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 NEK1Q96PY6 1258 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SERINC2Q96SA4 455 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 FUZQ9BT04 418 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SCNM1Q9BWG6 230 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 MEGF9Q9H1U4 602 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 GLOD4Q9HC38 313 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 ERVK-5Q9HDB9 667 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 KCNK9Q9NPC2 374 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM74BQ9NUR3 256 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 TSPYL4Q9UJ04 414 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SERTAD3Q9UJW9 196 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 RIMKLBQ9ULI2 386 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 DRG1Q9Y295 367 aaKnown RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 MICAL3Q7RTP6 2002 aa5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 SETD2Q9BYW2 2564 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P23-201ENST00000518743 CLSPNQ9HAW4 1339 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3DA0A087WVF3 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3IA0A087WXS9 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3EA0A087X179 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3KA0A087X1G2 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 A6NCN8 305 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3BA6NDS4 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3FA6NER0 549 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 DDTLA6NHG4 134 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 FAM90A20PA6NIJ5 464 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 SLC38A8A6NNN8 435 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3LB9A6J9 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMEM232C9JQI7 657 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 STX16-NPEPL1H3BU86 382 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 RNASET2O00584 256 aaKnown RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 STX16O14662 325 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 KLK10O43240 276 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CBFA2T3O75081 653 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CABYRO75952 493 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 C1QL1O75973 258 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 GFPT2O94808 682 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CCNDBP1O95273 360 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 KCNK5O95279 499 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 PGK2P07205 417 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CSF1P09603 554 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 DLDP09622 509 aaKnown RBP5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 IQCF3P0C7M6 154 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 TBC1D3HP0C7X1 549 aa5.06□□□□□ -1.6
HMGB1P23-201ENST00000518743 CPA1P15085 419 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 626.6 ms