RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 CLDN16Q9Y5I7 305 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 IRAK2O43187 625 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 ITM2AO43736 263 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 IL1AP01583 271 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 FCGR1AP12314 374 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 AMTP48728 403 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 ART1P52961 327 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 SEC61A1P61619 476 aaKnown RBP4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 GRSF1Q12849 480 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 BIRC2Q13490 618 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 PLCB4Q15147 1175 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 C9orf57Q5W0N0 161 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 NAPEPLDQ6IQ20 393 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 GJB7Q6PEY0 223 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 C16orf82Q7Z2V1 217 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 USP38Q8NB14 1042 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 SPATA5Q8NB90 893 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 SETD9Q8NE22 299 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 AFG1LQ8WV93 481 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 CCT6BQ92526 530 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 MASTLQ96GX5 879 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 PLSCR4Q9NRQ2 329 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 OCIAD1Q9NX40 245 aa4.89□□□□□ -1.63
UBE2D3-218ENST00000505009 LINC01553A4QN01 128 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 B9A039 149 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 FAM157AC9JC47 383 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 STX16O14662 325 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 CKMT1AP12532 417 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 COMPP49747 757 aaPredicted RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 PAPOLAP51003 745 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 CTTNQ14247 550 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 ME3Q16798 604 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 Q6ZTC4 211 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 NEK10Q6ZWH5 1172 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 SUGP1Q8IWZ8 645 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 OR4N2Q8NGD1 307 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 RNFT2Q96EX2 444 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 SLITRK1Q96PX8 696 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 RPS6KC1Q96S38 1066 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 MSTO1Q9BUK6 570 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 WDR6Q9NNW5 1121 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 ENTPD7Q9NQZ7 604 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 ATP8A2Q9NTI2 1148 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 RRP7AQ9Y3A4 280 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 RIPOR2Q9Y4F9 1068 aa4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
UBE2D3-218ENST00000505009 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 KDM4EB2RXH2 506 aaPredicted RBP4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 ANP32CO43423 234 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 SERPINC1P01008 464 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 DCTDP32321 178 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 GAS1P54826 345 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 ST3GAL1Q11201 340 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 EFR3AQ14156 821 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 ANKRD1Q15327 319 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 RPE65Q16518 533 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 CREB3L2Q70SY1 520 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 MOGAT3Q86VF5 341 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 GHDCQ8N2G8 530 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 RASSF8Q8NHQ8 419 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 TBC1D22AQ8WUA7 517 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 OTULINQ96BN8 352 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 MVB12BQ9H7P6 319 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 TTC12Q9H892 705 aaPredicted RBP4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 CNPY2Q9Y2B0 182 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 GDAQ9Y2T3 454 aa4.87□□□□□ -1.63
UBE2D3-218ENST00000505009 SRRM3A6NNA2 597 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 BTBD18B2RXH4 712 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 SLC25A17O43808 307 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 KCNJ13O60928 360 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 SERPINI2O75830 405 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 RXRAP19793 462 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 HNF1BP35680 557 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 TRAPPC10P48553 1259 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 ARL4CP56559 192 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 ADORA2A-AS1P86434 159 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 COASYQ13057 564 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 C10orf62Q5T681 223 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 FTSJ3Q8IY81 847 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 TRIM63Q969Q1 353 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 RTP4Q96DX8 246 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 FIZ1Q96SL8 496 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 VPS33BQ9H267 617 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 IL25Q9H293 177 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 CLK4Q9HAZ1 481 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 IFT80Q9P2H3 777 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 SLC45A1Q9Y2W3 748 aa4.86□□□□□ -1.63
UBE2D3-218ENST00000505009 IGLV5-52A0A0A0MRZ9 124 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 A0A1B0GUV1 79 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 DENND3A2RUS2 1198 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 SMTNL1A8MU46 457 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 CHL1O00533 1208 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 DHX16O60231 1041 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 DHRS4L1P0CG22 281 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 MYF6P23409 242 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 CENPAP49450 140 aa4.85□□□□□ -1.63
UBE2D3-218ENST00000505009 MXI1P50539 228 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms