RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF354CQ86Y25 554 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 RYBPQ8N488 228 aaPredicted RBP19.24■□□□□ 0.67
COL5A1-203ENST00000460264 PNPLA1Q8N8W4 532 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 TMEM145Q8NBT3 493 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 ADAMTS14Q8WXS8 1223 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 KLK6Q92876 244 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 GATA6Q92908 595 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 VOPP1Q96AW1 172 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 TRIM11Q96F44 468 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 SNRNP25Q9BV90 132 aaKnown RBP19.24■□□□□ 0.67
COL5A1-203ENST00000460264 ERVMER34-1Q9H9K5 563 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 TOR4AQ9NXH8 423 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 ZFR2Q9UPR6 939 aaKnown RBP19.24■□□□□ 0.67
COL5A1-203ENST00000460264 SCINQ9Y6U3 715 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 SPEGQ15772 3267 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 EIF3CLB5ME19 914 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 SLC31A1O15431 190 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 YKT6O15498 198 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 PCDH8O95206 1070 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 ATXN1LP0C7T5 689 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 MYBL1P10243 752 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 ARRB1P49407 418 aaPredicted RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 SNRPD1P62314 119 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 SERINC3Q13530 473 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 STAT4Q14765 748 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 CA9Q16790 459 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 TDRD12Q587J7 1177 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 ATXN7L2Q5T6C5 722 aaPredicted RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 SEL1L3Q68CR1 1132 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 FBXL19Q6PCT2 694 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 CYP4V2Q6ZWL3 525 aaPredicted RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 GATAD2AQ86YP4 633 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 SYN2Q92777 582 aaPredicted RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 LRIG1Q96JA1 1093 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 EIF3CQ99613 913 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 MYOCQ99972 504 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 ISCUQ9H1K1 167 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 DHX35Q9H5Z1 703 aaKnown RBP19.23■□□□□ 0.67
COL5A1-203ENST00000460264 PCSK1NQ9UHG2 260 aa19.23■□□□□ 0.67
COL5A1-203ENST00000460264 PLXNB3Q9ULL4 1909 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 KRIT1O00522 736 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 MAGEC1O60732 1142 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 RNF8O76064 485 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 DKK1O94907 266 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 PROS1P07225 676 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 EPHA8P29322 1005 aaPredicted RBP19.22■□□□□ 0.67
COL5A1-203ENST00000460264 ZNF805Q5CZA5 627 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 ERMARDQ5T6L9 678 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 OXR1Q8N573 874 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 SAP25Q8TEE9 199 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 CASKIN2Q8WXE0 1202 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 GDAP1L1Q96MZ0 367 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 OSBPL1AQ9BXW6 950 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 LRRC19Q9H756 370 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 FZD3Q9NPG1 666 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 MYO1AQ9UBC5 1043 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 MSRB2Q9Y3D2 182 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 FADS3Q9Y5Q0 445 aa19.22■□□□□ 0.67
COL5A1-203ENST00000460264 BZW2Q9Y6E2 419 aaKnown RBP19.22■□□□□ 0.67
COL5A1-203ENST00000460264 FAM221BA6H8Z2 402 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 EEF2KO00418 725 aaKnown RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 TNFSF14O43557 240 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 AP1G1O43747 822 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 PRPSAP2O60256 369 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 LRCH4O75427 683 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 POP4O95707 220 aaKnown RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 UGT2B4P06133 528 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 HNRNPA2B1P22626 353 aaKnown RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 MIPP30301 263 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 AKT2P31751 481 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 ABL2P42684 1182 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 RXRGP48443 463 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 ZBED6P86452 979 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 MYLK3Q32MK0 819 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 INO80DQ53TQ3 878 aaPredicted RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 KIAA1161Q6NSJ0 714 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 IQCDQ96DY2 449 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 KCTD15Q96SI1 283 aaPredicted RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 MRPL47Q9HD33 250 aaKnown RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 DONSONQ9NYP3 566 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 IFNKQ9P0W0 207 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 LHX3Q9UBR4 397 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 FTSJ1Q9UET6 329 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 CAPN11Q9UMQ6 739 aa19.21■□□□□ 0.67
COL5A1-203ENST00000460264 ARID1BQ8NFD5 2236 aaPredicted RBP19.21■□□□□ 0.67
COL5A1-203ENST00000460264 ANKRD36A6QL64 1941 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 C16orf96A6NNT2 1141 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 IGSF6O95976 241 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 GYPCP04921 128 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 SERPING1P05155 500 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 ITGAVP06756 1048 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 NDST2P52849 883 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 RHOAP61586 193 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 RPS21P63220 83 aaKnown RBP19.2■□□□□ 0.66
COL5A1-203ENST00000460264 GCNT7Q6ZNI0 430 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 RFX8Q6ZV50 586 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 PSTKQ8IV42 348 aaKnown RBP19.2■□□□□ 0.66
COL5A1-203ENST00000460264 NETO2Q8NC67 525 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 RAB7BQ96AH8 199 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 KLHDC7BQ96G42 594 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms