RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PSMA2P25787 234 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 ARRB1P49407 418 aaPredicted RBP19.72■□□□□ 0.75
USP40-207ENST00000450940 SNRPD1P62314 119 aaKnown RBP19.72■□□□□ 0.75
USP40-207ENST00000450940 TPM4P67936 248 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 SERINC3Q13530 473 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 INAVAQ3KP66 663 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 PARP15Q460N3 678 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 HGSNATQ68CP4 663 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 DNAAF5Q86Y56 855 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 PNPLA1Q8N8W4 532 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 TM6SF2Q9BZW4 377 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 KLC2Q9H0B6 622 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 FADS3Q9Y5Q0 445 aa19.72■□□□□ 0.75
USP40-207ENST00000450940 SPEGQ15772 3267 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 TMEM8BA6NDV4 472 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 RASA4BC9J798 803 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 RASA4O43374 803 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 PTMSP20962 102 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 EPHA8P29322 1005 aaPredicted RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 IL9RQ01113 521 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 MYLK3Q32MK0 819 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 ZNF805Q5CZA5 627 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 ERMARDQ5T6L9 678 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 FBXL19Q6PCT2 694 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 CYP4V2Q6ZWL3 525 aaPredicted RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 PARS2Q7L3T8 475 aaKnown RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 KANSL1Q7Z3B3 1105 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 ZSCAN30Q86W11 494 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 PSTKQ8IV42 348 aaKnown RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 RAB7BQ96AH8 199 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 TRIM11Q96F44 468 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 HMCESQ96FZ2 354 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 ZDHHC6Q9H6R6 413 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 LRRC19Q9H756 370 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 DONSONQ9NYP3 566 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 CNOT8Q9UFF9 292 aaKnown RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 AP4E1Q9UPM8 1137 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 MFHAS1Q9Y4C4 1052 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 BZW2Q9Y6E2 419 aaKnown RBP19.71■□□□□ 0.75
USP40-207ENST00000450940 IGF2RP11717 2491 aa19.71■□□□□ 0.75
USP40-207ENST00000450940 SLC31A1O15431 190 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 BUB1O43683 1085 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 PCDH8O95206 1070 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 MYBL1P10243 752 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 PRLRP16471 622 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 HNRNPA2B1P22626 353 aaKnown RBP19.7■□□□□ 0.74
USP40-207ENST00000450940 NDST2P52849 883 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 UBASH3AP57075 661 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 RPS21P63220 83 aaKnown RBP19.7■□□□□ 0.74
USP40-207ENST00000450940 KIAA1161Q6NSJ0 714 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 LEKR1Q6ZMV7 388 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 GATAD2AQ86YP4 633 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 FAM174AQ8TBP5 190 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 IQCDQ96DY2 449 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 KLHDC7BQ96G42 594 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 FEM1CQ96JP0 617 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 PEBP4Q96S96 227 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 NCAPGQ9BPX3 1015 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 OSBPL1AQ9BXW6 950 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 TRIM7Q9C029 511 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 HS3ST3A1Q9Y663 406 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 SCINQ9Y6U3 715 aa19.7■□□□□ 0.74
USP40-207ENST00000450940 C16orf96A6NNT2 1141 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 RNF8O76064 485 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 TMCC1O94876 653 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 ITGAVP06756 1048 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 AKT2P31751 481 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 GKP32189 559 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 TPI1P60174 286 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 ACAP1Q15027 740 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 CA9Q16790 459 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 SEL1L3Q68CR1 1132 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 ABI3BPQ7Z7G0 1075 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 OR6K2Q8NGY2 324 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 ASB12Q8WXK4 309 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 KLK6Q92876 244 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 ZNF653Q96CK0 615 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 SNRNP25Q9BV90 132 aaKnown RBP19.69■□□□□ 0.74
USP40-207ENST00000450940 C1QTNF2Q9BXJ5 285 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 SLC17A9Q9BYT1 436 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 MRPL47Q9HD33 250 aaKnown RBP19.69■□□□□ 0.74
USP40-207ENST00000450940 GPATCH2LQ9NWQ4 482 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 CAPN11Q9UMQ6 739 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 CA5BQ9Y2D0 317 aa19.69■□□□□ 0.74
USP40-207ENST00000450940 KRIT1O00522 736 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 TSPAN6O43657 245 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 LRCH4O75427 683 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 MIPP30301 263 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 HCAR3P49019 387 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 ZNF135P52742 658 aaPredicted RBP19.68■□□□□ 0.74
USP40-207ENST00000450940 ZBED6P86452 979 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 BNIP3Q12983 259 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 FGL2Q14314 439 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 ATXN7L2Q5T6C5 722 aaPredicted RBP19.68■□□□□ 0.74
USP40-207ENST00000450940 AFMIDQ63HM1 303 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 CCNI2Q6ZMN8 369 aaPredicted RBP19.68■□□□□ 0.74
USP40-207ENST00000450940 RYBPQ8N488 228 aaPredicted RBP19.68■□□□□ 0.74
USP40-207ENST00000450940 GDAP1L1Q96MZ0 367 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 DHX35Q9H5Z1 703 aaKnown RBP19.68■□□□□ 0.74
USP40-207ENST00000450940 PDFQ9HBH1 243 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms