RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ZNF683Q8IZ20 524 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 TDRD5Q8NAT2 981 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 GPR152Q8TDT2 470 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 KCTD4Q8WVF5 259 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 STMN2Q93045 179 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 PABPC5Q96DU9 382 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SPATA17Q96L03 361 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 FAM161BQ96MY7 647 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 RPRD1AQ96P16 312 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 CASD1Q96PB1 797 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 RANBP9Q96S59 729 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 TMEM175Q9BSA9 504 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MCMBPQ9BTE3 642 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MRPL9Q9BYD2 267 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ATXN3LQ9H3M9 355 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 DENND2DQ9H6A0 471 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 VPS45Q9NRW7 570 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MARCH5Q9NX47 278 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 TAS2R1Q9NYW7 299 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SLC2A6Q9UGQ3 507 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MCM8Q9UJA3 840 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 FBXO5Q9UKT4 447 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 PHF24Q9UPV7 400 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SLC27A5Q9Y2P5 690 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ACOT9Q9Y305 439 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 FAM92AA1XBS5 289 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 TBKBP1A7MCY6 615 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 H0Y3Z8 333 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 J3KR12 359 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 MAGEC1O60732 1142 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 RAMP2O60895 175 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 CNTN5O94779 1100 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 GNRH1P01148 92 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 AHSGP02765 367 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 AOC1P19801 751 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 CRABP2P29373 138 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 CD86P42081 329 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 SLC1A2P43004 574 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 KPNA1P52294 538 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 HK2P52789 917 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 YBEYP58557 167 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 MAXP61244 160 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 DSC2Q02487 901 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 IL10RBQ08334 325 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 GPR17Q13304 367 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 TUBB3Q13509 450 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ZRSR2Q15696 482 aaKnown RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ALFQ53S48 1182 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 LIPMQ5VYY2 423 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ZNF470Q6ECI4 717 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 FBXL22Q6P050 247 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 RANBP10Q6VN20 620 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ANKS3Q6ZW76 656 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 DENND6AQ8IWF6 608 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ENDOVQ8N8Q3 282 aaKnown RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 GPATCH11Q8N954 259 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 C2CD4AQ8NCU7 369 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ACVR1CQ8NER5 493 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 IMP4Q96G21 291 aaKnown RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ZNF419Q96HQ0 510 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 KLHL5Q96PQ7 755 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 GATA5Q9BWX5 397 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 C1QTNF1Q9BXJ1 281 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ILKAPQ9H0C8 392 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 DCLRE1BQ9H816 532 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 TREX1Q9NSU2 369 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 CPSF2Q9P2I0 782 aaKnown RBP10.55□□□□□ -0.72
CPNE1-218ENST00000439806 SCN5AQ14524 2016 aa10.55□□□□□ -0.72
CPNE1-218ENST00000439806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-218ENST00000439806 DRGXA6NNA5 263 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 VGLL3A8MV65 326 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 F5H5T6 163 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TK2O00142 265 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 NBNO60934 754 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TRPA1O75762 1119 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 TBX18O95935 607 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 PEX11BO96011 259 aa10.54□□□□□ -0.72
CPNE1-218ENST00000439806 SLC35E2BP0CK96 405 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms