RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TBC1D3GQ6DHY5 549 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 TBC1D3CQ6IPX1 549 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 CTU1Q7Z7A3 348 aaKnown RBP5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 SYTL1Q8IYJ3 562 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 TBC1D3Q8IZP1 549 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 FBXL14Q8N1E6 418 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 ATP2A3Q93084 1043 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 TNIP3Q96KP6 325 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 SF3B5Q9BWJ5 86 aaKnown RBP5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 ISCUQ9H1K1 167 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 TXNRD2Q9NNW7 524 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 SIRT3Q9NTG7 399 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 PGAP2Q9UHJ9 254 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 NFU1Q9UMS0 254 aa5.35□□□□□ -1.55
HMGB3P5-201ENST00000428894 LTBP1Q14766 1721 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 CYP3A7-CYP3A51PA0A087WV96 503 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 PRR23D1E9PI22 279 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 MSI1O43347 362 aaKnown RBP5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 DNPH1O43598 174 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 SLC28A2O43868 658 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 PRR23D2P0DMB1 279 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 CYP3A7P24462 503 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 MLH1P40692 756 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 KCNJ4P48050 445 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 HUNKP57058 714 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 FAM3BP58499 235 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 ERAP2Q6P179 960 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 MDGA2Q7Z553 956 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 SRLQ86TD4 932 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 DEPTORQ8TB45 409 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 SGCZQ96LD1 299 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 MECRQ9BV79 373 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 ARHGAP39Q9C0H5 1083 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 MAP6D1Q9H9H5 199 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 TBC1D14Q9P2M4 693 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 PCDHA7Q9UN72 937 aa5.34□□□□□ -1.55
HMGB3P5-201ENST00000428894 HEG1Q9ULI3 1381 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 NEURL1O76050 574 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 CAMTA2O94983 1202 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 MYL1P05976 194 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 RNASELQ05823 741 aaKnown RBP5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 TEFQ10587 303 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 TNIP1Q15025 636 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ENTPD8Q5MY95 495 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 RGMBQ6NW40 437 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 PDXDC1Q6P996 788 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ZNF790Q6PG37 636 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 PARM1Q6UWI2 310 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ADHFE1Q8IWW8 467 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 SMRP1Q8NCR6 262 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 CLEC4CQ8WTT0 213 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 MIB2Q96AX9 1013 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ZNF419Q96HQ0 510 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 NYXQ9GZU5 481 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 TP63Q9H3D4 680 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 ARNT2Q9HBZ2 717 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 RNF186Q9NXI6 227 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 FBXO4Q9UKT5 387 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 PROCRQ9UNN8 238 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 INSL5Q9Y5Q6 135 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 SCN7AQ01118 1682 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 EVPLQ92817 2033 aa5.33□□□□□ -1.56
HMGB3P5-201ENST00000428894 CDHR2Q9BYE9 1310 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 C4orf47A7E2U8 309 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 KCNJ18B7U540 433 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 MCIDASD6RGH6 385 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 ASNA1O43681 348 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 LCKP06239 509 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 TGFB3P10600 412 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 PLA2G2AP14555 144 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 RFX2P48378 723 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 ADPRHP54922 357 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 ALG10Q5BKT4 473 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 ARL13AQ5H913 290 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 ALG10BQ5I7T1 473 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 Q5PR19 223 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 RTL10Q7L3V2 364 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 KDELC2Q7Z4H8 507 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 MORC1Q86VD1 984 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 GATAD2AQ86YP4 633 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 IQCF1Q8N6M8 205 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 C7orf57Q8NEG2 295 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 CTAGE1Q96RT6 745 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 POLR3GLQ9BT43 218 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 SORBS1Q9BX66 1292 aaKnown RBP5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 TMEM120AQ9BXJ8 343 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 GLIS2Q9BZE0 524 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 MAGEH1Q9H213 219 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 SLCO5A1Q9H2Y9 848 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 HIF1ANQ9NWT6 349 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 NIP7Q9Y221 180 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 COPG1Q9Y678 874 aaKnown RBP5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 MRC1P22897 1456 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 UBR2Q8IWV8 1755 aa5.32□□□□□ -1.56
HMGB3P5-201ENST00000428894 GAGE12JA6NER3 117 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 AQP12BA6NM10 295 aa5.31□□□□□ -1.56
HMGB3P5-201ENST00000428894 PPIP5K2O43314 1243 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms